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rifoxyc1_full_scaffold_941

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyc1_full_scaffold_941_1
AR19, Pacearchaeaota, DPANN, Archaea

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comp(1..639)
DNA (639bp) protein (213aa)
Tax=AR19
rifoxyc1_full_scaffold_941_2
AR1, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(670..1179)
DNA (510bp) protein (170aa)
50S ribosomal protein L15P Tax=AR1
50S ribosomal protein L27; K02876 large subunit ribosomal protein L15 id=5046862 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L15P
rifoxyc1_full_scaffold_941_3

Not on your lists


comp(1179..1541)
DNA (363bp) protein (121aa)
50S ribosomal protein L30P n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECG6_PYRF1
50S ribosomal protein L30P {ECO:0000313|EMBL:KHO52078.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
50S ribosomal protein L30P
rifoxyc1_full_scaffold_941_4
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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comp(1538..2374)
DNA (837bp) protein (279aa)
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 Tax=RBG_16_Pacearchaeota_35_8_curated
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 id=5041779 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S5
rifoxyc1_full_scaffold_941_5

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comp(2374..2862)
DNA (489bp) protein (163aa)
50S ribosomal protein L18P n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IBI0_ACIB4
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L18
rifoxyc1_full_scaffold_941_6

Not on your lists

comp(2859..3266)
DNA (408bp) protein (136aa)
50S ribosomal protein L19e n=2 Tax=Halobacterium salinarum RepID=RL19E_HALSA
Marine sediment metagenome DNA, contig: S12H4_S16718 {ECO:0000313|EMBL:GAJ13137.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rpl19e; 50S ribosomal protein L19
rifoxyc1_full_scaffold_941_7

Not on your lists


comp(3263..3655)
DNA (393bp) protein (131aa)
50S ribosomal protein L32e n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VQL6_9EURY
50S ribosomal protein L32, large subunit ribosomal protein L32e {ECO:0000313|EMBL:KHO55522.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
50S ribosomal protein L32e
rifoxyc1_full_scaffold_941_8

Not on your lists


comp(3656..4198)
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=5 Tax=Thermococcus RepID=RL6_PYRKO id=5103268 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L6P {ECO:0000313|EMBL:AJS11564.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L6
rifoxyc1_full_scaffold_941_9

Not on your lists


comp(4198..4578)
DNA (381bp) protein (127aa)
30S ribosomal protein S8 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS8_NANEQ
30S ribosomal protein S8P, small subunit ribosomal protein S8 {ECO:0000313|EMBL:AJS12907.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps8p; 30S ribosomal protein S8P
rifoxyc1_full_scaffold_941_10
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(4602..4832)
DNA (231bp) protein (77aa)
hypothetical protein; K02954 small subunit ribosomal protein S14 Tax=CG_Pacearch_01
hypothetical protein; K02954 small subunit ribosomal protein S14 id=5041773 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
SSU ribosomal protein S14P
rifoxyc1_full_scaffold_941_11

Not on your lists


comp(4829..5389)
DNA (561bp) protein (187aa)
50S ribosomal protein L5 n=1 Tax=nanoarchaeote Nst1 RepID=R1G3A2_9ARCH
50S ribosomal protein L5P {ECO:0000313|EMBL:AJS11694.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
large subunit ribosomal protein L5
rifoxyc1_full_scaffold_941_12
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(5386..6036)
DNA (651bp) protein (217aa)
30S ribosomal protein S4e n=1 Tax=nanoarchaeote Nst1 RepID=R1FU02_9ARCH
SSU ribosomal protein s4e; K02987 small subunit ribosomal protein S4e Tax=RBG_13_Pacearchaeota_33_26_curated
rps4e; 30S ribosomal protein S4e
rifoxyc1_full_scaffold_941_13

Not on your lists


comp(6036..6473)
DNA (438bp) protein (146aa)
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 id=5042312 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rpl24p; 50S ribosomal protein L24
rifoxyc1_full_scaffold_941_14

Not on your lists


comp(6475..6876)
DNA (402bp) protein (134aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5046849 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L14P
rifoxyc1_full_scaffold_941_15

Not on your lists


comp(6873..7226)
DNA (354bp) protein (118aa)
30S ribosomal protein S17P n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RT69_METFO
30S ribosomal protein S17P {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
ribosomal protein S17P Rps17p
rifoxyc1_full_scaffold_941_16
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(7261..7560)
DNA (300bp) protein (100aa)
Protein translation factor SUI1 homolog n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VQK7_9EURY
translation initiation factor Sui1; K03113 translation initiation factor 1 Tax=AR13
translation initiation factor Sui1
rifoxyc1_full_scaffold_941_17

Not on your lists


comp(7563..7760)
DNA (198bp) protein (66aa)
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifoxyc1_full_scaffold_941_18

Not on your lists


comp(7757..8428)
DNA (672bp) protein (224aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GU39_9ZZZZ
30S ribosomal protein S3 {ECO:0000313|EMBL:AJS11622.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S3
rifoxyc1_full_scaffold_941_19

Not on your lists


comp(8486..9112)
DNA (627bp) protein (209aa)
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rifoxyc1_full_scaffold_941_20

Not on your lists


comp(9115..9516)
DNA (402bp) protein (134aa)
30S ribosomal protein S19 n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=RS19_METMA
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps19p; 30S ribosomal protein S19
rifoxyc1_full_scaffold_941_21

Not on your lists


comp(9518..10213)
DNA (696bp) protein (232aa)
50S ribosomal protein L2P {ECO:0000313|EMBL:AJS11921.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L2 id=5800061 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L2
rifoxyc1_full_scaffold_941_22

Not on your lists


comp(10213..10455)
DNA (243bp) protein (81aa)
50S ribosomal protein L23P n=1 Tax=Thermococcus sp. CL1 RepID=I3ZSZ8_9EURY
Large subunit ribosomal protein L23 {ECO:0000313|EMBL:KHO50293.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
50S ribosomal protein L23
rifoxyc1_full_scaffold_941_23

Not on your lists


comp(10452..11252)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E203C
50S ribosomal protein L4P, large subunit ribosomal protein L4e {ECO:0000313|EMBL:AJS13345.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L4
rifoxyc1_full_scaffold_941_24

Not on your lists


comp(11252..12196)
DNA (945bp) protein (315aa)
50S ribosomal protein L3P {ECO:0000313|EMBL:AJS11575.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5042300 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L3
DPANN Jill Banfield (12/4/14)
rifoxyc1_full_scaffold_941_25
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(12298..12996)
DNA (699bp) protein (233aa)
id=5048829 Tax=CG_Pacearch_01
id=5048829 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifoxyc1_full_scaffold_941_26
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

13104..14114
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036CCA3F
Predicted permease Tax=AR13
hypothetical protein
rifoxyc1_full_scaffold_941_27
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

14121..15596
DNA (1476bp) protein (492aa)
thymidine phosphorylase; K00758 thymidine phosphorylase [EC:2.4.2.4] Tax=RBG_13_Pacearchaeota_33_26_curated
thymidine phosphorylase; K00758 thymidine phosphorylase [EC:2.4.2.4] id=5096038 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
deoA; thymidine phosphorylase (EC:2.4.2.4)
rifoxyc1_full_scaffold_941_28
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

15641..15910
DNA (270bp) protein (90aa)
Tax=CG_Pacearch_01
rifoxyc1_full_scaffold_941_29
unknown

Not on your lists

comp(15985..16728)
DNA (744bp) protein (248aa)

This feature has no annotations

rifoxyc1_full_scaffold_941_30
unknown

Not on your lists

comp(16725..17111)
DNA (387bp) protein (129aa)

This feature has no annotations

Displaying items 1-30 of 34 in total

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