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rifoxya1_full_scaffold_2473

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya1_full_scaffold_2473_1
unknown

Not on your lists

comp(1..714)
DNA (714bp) protein (238aa)

This feature has no annotations

rifoxya1_full_scaffold_2473_2
AR19, Pacearchaeaota, DPANN, Archaea

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comp(711..1424)
DNA (714bp) protein (238aa)
Tax=AR19
rifoxya1_full_scaffold_2473_3
AR1, Pacearchaeaota, DPANN, Archaea

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comp(1455..1964)
DNA (510bp) protein (170aa)
50S ribosomal protein L15P Tax=AR1
50S ribosomal protein L15P alias=gwa2_scaffold_1772_45 id=5046862 tax=GW2011_AR18 species=unknown genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L15P
rifoxya1_full_scaffold_2473_4

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comp(1964..2326)
DNA (363bp) protein (121aa)
50S ribosomal protein L30P n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECG6_PYRF1
50S ribosomal protein L30P {ECO:0000313|EMBL:KHO52078.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
50S ribosomal protein L30P
rifoxya1_full_scaffold_2473_5
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


comp(2323..2964)
DNA (642bp) protein (214aa)
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 Tax=RBG_13_Pacearchaeota_33_26_curated
30S ribosomal protein S5
30S ribosomal protein S5 alias=gwa2_scaffold_32_385 id=5040253 tax=GW2011_AR20 species=Nanoarchaeum equitans genus=Nanoarchaeum taxon_order=unknown taxon_class=unknown phylum=Nanoarchaeota organism_desc=DELETE: see complete genome
rifoxya1_full_scaffold_2473_6

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comp(2913..3461)
DNA (549bp) protein (183aa)
50S ribosomal protein L18P n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IBI0_ACIB4
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L18
rifoxya1_full_scaffold_2473_7

Not on your lists

comp(3458..3865)
DNA (408bp) protein (136aa)
50S ribosomal protein L19e n=2 Tax=Halobacterium salinarum RepID=RL19E_HALSA
Marine sediment metagenome DNA, contig: S12H4_S16718 {ECO:0000313|EMBL:GAJ13137.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rpl19e; 50S ribosomal protein L19
rifoxya1_full_scaffold_2473_8

Not on your lists


comp(3862..4254)
DNA (393bp) protein (131aa)
50S ribosomal protein L32e n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VQL6_9EURY
50S ribosomal protein L32, large subunit ribosomal protein L32e {ECO:0000313|EMBL:KHO55522.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
50S ribosomal protein L32e
rifoxya1_full_scaffold_2473_9

Not on your lists


comp(4255..4728)
DNA (474bp) protein (158aa)
50S ribosomal protein L6P {ECO:0000313|EMBL:AJS11564.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl6p; 50S ribosomal protein L6P; K02933 large subunit ribosomal protein L6 alias=gwa2_scaffold_32_381 id=5040249 tax=GW2011_AR20 species=unknown genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota organism_desc=DELETE: see complete genome
50S ribosomal protein L6
rifoxya1_full_scaffold_2473_10
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists


comp(4725..5066)
DNA (342bp) protein (114aa)
30S ribosomal protein S8 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS8_NANEQ
rps8p; 30S ribosomal protein S8P; K02994 small subunit ribosomal protein S8 Tax=CG_Pacearch_01
rps8p; 30S ribosomal protein S8P
rifoxya1_full_scaffold_2473_11
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists


comp(5090..5320)
DNA (231bp) protein (77aa)
hypothetical protein; K02954 small subunit ribosomal protein S14 Tax=CG_Pacearch_01
30S ribosomal protein S14 type Z alias=gwa2_scaffold_135_37 id=5041773 tax=GW2011_AR4 species=Candidatus Nanosalina sp. J07AB43 genus=Candidatus Nanosalina taxon_order=unknown taxon_class=Nanohaloarchaea phylum=Euryarchaeota organism_desc=gwa2_.45_18
SSU ribosomal protein S14P
rifoxya1_full_scaffold_2473_12

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comp(5317..5877)
DNA (561bp) protein (187aa)
50S ribosomal protein L5 n=1 Tax=nanoarchaeote Nst1 RepID=R1G3A2_9ARCH
50S ribosomal protein L5P {ECO:0000313|EMBL:AJS11694.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
large subunit ribosomal protein L5
rifoxya1_full_scaffold_2473_13
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(5874..6524)
DNA (651bp) protein (217aa)
30S ribosomal protein S4e n=1 Tax=nanoarchaeote Nst1 RepID=R1FU02_9ARCH
SSU ribosomal protein s4e; K02987 small subunit ribosomal protein S4e Tax=RBG_13_Pacearchaeota_33_26_curated
rps4e; 30S ribosomal protein S4e
rifoxya1_full_scaffold_2473_14

Not on your lists


comp(6524..6961)
DNA (438bp) protein (146aa)
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 alias=gwa2_scaffold_210_69 id=5042312 tax=GW2011_AR3 species=unknown genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota organism_desc=gwa2_.43_13b
rpl24p; 50S ribosomal protein L24
rifoxya1_full_scaffold_2473_15

Not on your lists


comp(6963..7364)
DNA (402bp) protein (134aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 alias=gwa2_scaffold_1772_32 id=5046849 tax=GW2011_AR18 species=unknown genus=unknown taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L14P
rifoxya1_full_scaffold_2473_16

Not on your lists


comp(7361..7714)
DNA (354bp) protein (118aa)
30S ribosomal protein S17P n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RT69_METFO
30S ribosomal protein S17P {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
ribosomal protein S17P Rps17p
rifoxya1_full_scaffold_2473_17
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(7749..8048)
DNA (300bp) protein (100aa)
Protein translation factor SUI1 homolog n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VQK7_9EURY
translation initiation factor Sui1; K03113 translation initiation factor 1 Tax=AR13
translation initiation factor Sui1
rifoxya1_full_scaffold_2473_18

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comp(8051..8248)
DNA (198bp) protein (66aa)
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifoxya1_full_scaffold_2473_19

Not on your lists


comp(8245..8916)
DNA (672bp) protein (224aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GU39_9ZZZZ
30S ribosomal protein S3 {ECO:0000313|EMBL:AJS11622.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S3
DPANN Jill Banfield (10/31/14)
rifoxya1_full_scaffold_2473_20

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comp(8974..9600)
DNA (627bp) protein (209aa)
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rifoxya1_full_scaffold_2473_21

Not on your lists


comp(9603..10004)
DNA (402bp) protein (134aa)
30S ribosomal protein S19 n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=RS19_METMA
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps19p; 30S ribosomal protein S19
rifoxya1_full_scaffold_2473_22

Not on your lists


comp(10006..10701)
DNA (696bp) protein (232aa)
50S ribosomal protein L2P {ECO:0000313|EMBL:AJS11921.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L2 alias=AR15_final_v5_538 id=5800061 tax=GW2011_AR15 species=Archaeoglobus fulgidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota
50S ribosomal protein L2
rifoxya1_full_scaffold_2473_23

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comp(10701..10943)
DNA (243bp) protein (81aa)
50S ribosomal protein L23P n=1 Tax=Thermococcus sp. CL1 RepID=I3ZSZ8_9EURY
Large subunit ribosomal protein L23 {ECO:0000313|EMBL:KHO50293.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
50S ribosomal protein L23
rifoxya1_full_scaffold_2473_24

Not on your lists


comp(11052..11660)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E203C
50S ribosomal protein L4P {ECO:0000313|EMBL:AJS12724.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L4
rifoxya1_full_scaffold_2473_25

Not on your lists


comp(11660..12604)
DNA (945bp) protein (315aa)
50S ribosomal protein L3P {ECO:0000313|EMBL:AJS11575.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 alias=gwa2_scaffold_210_57 id=5042300 tax=GW2011_AR3 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L3
rifoxya1_full_scaffold_2473_26
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(12706..13404)
DNA (699bp) protein (233aa)
id=5048829 Tax=CG_Pacearch_01
alias=gwa2_scaffold_2898_1 id=5048829 tax=GW2011_AR18 organism_desc=gwa2_.30_20c
rifoxya1_full_scaffold_2473_27
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

13512..14522
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036CCA3F
Predicted permease Tax=AR13
hypothetical protein
rifoxya1_full_scaffold_2473_28
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

14529..16004
DNA (1476bp) protein (492aa)
thymidine phosphorylase; K00758 thymidine phosphorylase [EC:2.4.2.4] Tax=RBG_13_Pacearchaeota_33_26_curated
deoA; thymidine phosphorylase (EC:2.4.2.4)
Putative thymidine phosphorylase alias=gwf2_scaffold_1238_13 id=5096038 tax=PER_GWF2_38_31 species=Methylophaga aminisulfidivorans genus=Methylophaga taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_desc=RuBisCO project
rifoxya1_full_scaffold_2473_29
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

16049..16318
DNA (270bp) protein (90aa)
Tax=CG_Pacearch_01
rifoxya1_full_scaffold_2473_30
unknown

Not on your lists

comp(16393..17136)
DNA (744bp) protein (248aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

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