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rifcsphigho2_01_scaffold_17512

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_17512_1
R_PER_ii_51_15, PER-ii, Bacteria

Not on your lists

comp(311..1765)
DNA (1455bp) protein (485aa)
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] Tax=RIFCSPHIGHO2_02_FULL_PER_ii_51_15_curated
Diaminopimelate decarboxylase n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BFD6_9EURY
diaminopimelate decarboxylase
rifcsphigho2_01_scaffold_17512_2
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1987..2604)
DNA (618bp) protein (206aa)
Tax=AR11
rifcsphigho2_01_scaffold_17512_3
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(2654..3070)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B60373
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
putative uncharacterized protein family UPF0047
rifcsphigho2_01_scaffold_17512_4
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

3123..4031
DNA (909bp) protein (303aa)
hypothetical protein; K07991 archaeal preflagellin peptidase FlaK [EC:3.4.23.52] Tax=AR11
Peptidase A24A prepilin type IV id=5800557 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Peptidase A24A prepilin type IV
rifcsphigho2_01_scaffold_17512_5
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4048..6606)
DNA (2559bp) protein (853aa)
PGAP1 family protein Tax=AR11
PGAP1 family protein id=5799748 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
PGAP1 family protein
rifcsphigho2_01_scaffold_17512_6
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


6757..7152
DNA (396bp) protein (132aa)
ribosomal protein S6e; K02991 small subunit ribosomal protein S6e Tax=AR11
SSU ribosomal protein S6E id=5799714 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ribosomal protein S6e
rifcsphigho2_01_scaffold_17512_7
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


7347..8579
DNA (1233bp) protein (411aa)
translation initiation factor IF-2; K03242 translation initiation factor 2 subunit 3 Tax=AR11
translation initiation factor 2 subunit gamma; K03242 translation initiation factor 2 subunit 3 id=5044023 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Translation initiation factor 2 subunit gamma
rifcsphigho2_01_scaffold_17512_8
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8598..8945)
DNA (348bp) protein (116aa)
id=5799837 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR11
rifcsphigho2_01_scaffold_17512_9
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8990..9661)
DNA (672bp) protein (224aa)
Tax=AR11
rifcsphigho2_01_scaffold_17512_10
unknown

Not on your lists

comp(9673..10293)
DNA (621bp) protein (207aa)

This feature has no annotations

rifcsphigho2_01_scaffold_17512_11
unknown

Not on your lists

comp(10418..10738)
DNA (321bp) protein (107aa)

This feature has no annotations

rifcsphigho2_01_scaffold_17512_12
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10748..11125)
DNA (378bp) protein (126aa)
30S ribosomal protein S8e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXJ1_METFV
SSU ribosomal protein s8e; K02995 small subunit ribosomal protein S8e Tax=AR11
30S ribosomal protein S8e
rifcsphigho2_01_scaffold_17512_13
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

11296..12351
DNA (1056bp) protein (352aa)
malate dehydrogenase; K00024 malate dehydrogenase [EC:1.1.1.37] Tax=AR11
Lactate/malate dehydrogenase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P026_HALMD
malate dehydrogenase
Displaying 13 items

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