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rifcsphigho2_01_scaffold_2877

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_2877_1
AR10, Diapherotrites, DPANN, Archaea

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411..1517
DNA (1107bp) protein (369aa)
cell division protein FtsZ
cell division protein FtsZ; K03531 cell division protein FtsZ id=5240969 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=AR10
rifcsphigho2_01_scaffold_2877_2
GWF2_OD1_45_11, Parcubacteria, Bacteria

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comp(1559..2050)
DNA (492bp) protein (164aa)
MgtC family protein n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YAR7_DICT6
MgtC/SapB transporter {ECO:0000313|EMBL:KKT92472.1}; TaxID=1618973 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_45_11.;"
MgtC family protein
rifcsphigho2_01_scaffold_2877_3

Not on your lists

comp(2091..3401)
DNA (1311bp) protein (437aa)
peptidase M50
peptidase M50 id=5240970 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Peptidase M50 {ECO:0000313|EMBL:AJF59961.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_01_scaffold_2877_4
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(3520..3975)
DNA (456bp) protein (152aa)
Predicted transcription factor (Eukaryotic MBF1 related) n=4 Tax=Methanobrevibacter RepID=A5UK32_METS3
transcription factor ( MBF1 related)
TIGR00270 family protein {ECO:0000313|EMBL:EFC94035.1}; TaxID=521002 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobre
rifcsphigho2_01_scaffold_2877_5
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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4078..5265
DNA (1188bp) protein (396aa)
26S proteasome subunit P45 family (EC:3.6.1.3)
Proteasome-activating nucleotidase n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2REY1_ARCPA
Proteasome-activating nucleotidase {ECO:0000256|HAMAP-Rule:MF_00553}; Short=PAN {ECO:0000256|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000256|HAMAP-Rule:MF_00553}; Proteasome regulatory ATPase {
rifcsphigho2_01_scaffold_2877_6
AR10, Diapherotrites, DPANN, Archaea

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5599..6675
DNA (1077bp) protein (359aa)
flap endonuclease-1 (EC:3.-.-.-)
Flap structure-specific endonuclease; K04799 flap endonuclease-1 [EC:3.-.-.-] id=5240697 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Flap structure-specific endonuclease; K04799 flap endonuclease-1 [EC:3.-.-.-] Tax=AR10
rifcsphigho2_01_scaffold_2877_7
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6676..7638
DNA (963bp) protein (321aa)
RNA methylase (EC:2.1.1.29)
RNA methylase, NOL1/NOP2/sun family n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBH3_METEZ
RNA methylase, NOL1/NOP2/sun family {ECO:0000313|EMBL:ADI74815.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Meth
rifcsphigho2_01_scaffold_2877_8
unknown

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7667..8038
DNA (372bp) protein (124aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2877_9
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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8071..8661
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DFZ3_9EURY
ydeN; putative sulfatase Tax=RBG_13_Pacearchaeota_36_9_curated
ydeN; putative sulfatase
rifcsphigho2_01_scaffold_2877_10
GWA2_OP3X_41_15_curated, OP3X, Bacteria

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8737..9738
DNA (1002bp) protein (334aa)
gap; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.-); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=GWA2_OP3X_41_15_curated
Glyceraldehyde-3-phosphate dehydrogenase 2 n=1 Tax=Bhargavaea cecembensis DSE10 RepID=M7NFU5_9BACL
glyceraldehyde-3-phosphate dehydrogenase
rifcsphigho2_01_scaffold_2877_11
AR10, Diapherotrites, DPANN, Archaea

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9731..10936
DNA (1206bp) protein (402aa)
3-phosphoglycerate kinase, phosphoglycerate kinase (EC:2.7.2.3)
Pgk; 3-phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3] id=5241458 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Pgk; 3-phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=AR10
rifcsphigho2_01_scaffold_2877_12
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(10943..11623)
DNA (681bp) protein (227aa)
protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] id=5240700 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=AR10
rifcsphigho2_01_scaffold_2877_13

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comp(11652..12563)
DNA (912bp) protein (304aa)
hypothetical protein
hypothetical protein; K07728 putative transcriptional regulator id=5240701 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Putative HTH-type transcriptional regulatory protein QT03_C0001G0187 {ECO:0000256|HAMAP-Rule:MF_00584}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_01_scaffold_2877_14

Not on your lists

comp(12605..13450)
DNA (846bp) protein (282aa)
4-hydroxybenzoate octaprenyltransferase (EC:2.5.1.-)
prenyltransferase UbiA; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] id=5240702 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
4-hydroxybenzoate octaprenyltransferase {ECO:0000313|EMBL:AJF59695.1}; EC=2.5.1.- {ECO:0000313|EMBL:AJF59695.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_01_scaffold_2877_15
R_Deltaproteobacteria_38_15, Deltaproteobacteria, Proteobacteria, Bacteria

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13927..14484
DNA (558bp) protein (186aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_38_15_curated
rifcsphigho2_01_scaffold_2877_16
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

14477..14932
DNA (456bp) protein (152aa)
Putative conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BM34_9EURY
putative conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN Tax=CG_Micra_04
putative conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN
rifcsphigho2_01_scaffold_2877_17
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

15083..15634
DNA (552bp) protein (184aa)
Metal dependent phophohydrolase id=4127724 bin=GWF2_Nitrospirae_44_13 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
metal dependent phophohydrolase; K06950 uncharacterized protein Tax=GWF2_Nitrospirae_44_13_curated
metal dependent phophohydrolase
rifcsphigho2_01_scaffold_2877_18

Not on your lists

comp(16318..17262)
DNA (945bp) protein (315aa)
protoheme IX farnesyltransferase (EC:2.5.1.-)
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] id=5240714 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Protoheme IX farnesyltransferase {ECO:0000313|EMBL:AJF59707.1}; EC=2.5.1.- {ECO:0000313|EMBL:AJF59707.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_01_scaffold_2877_19

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comp(22537..23829)
DNA (1293bp) protein (431aa)
Glucose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00115780}; EC=5.3.1.9 {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00115780};; TaxID=77133 species="Bacteria;
Glucose-6-phosphate isomerase n=1 Tax=uncultured bacterium RepID=K2FF78_9BACT
glucose-6-phosphate isomerase
rifcsphigho2_01_scaffold_2877_20
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(24181..24537)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B48435
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
rifcsphigho2_01_scaffold_2877_21
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(24530..24784)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B6D34B
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
rifcsphigho2_01_scaffold_2877_22
unknown

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comp(24886..25695)
DNA (810bp) protein (270aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2877_23
CG_Micra_05, Micraarchaeota, Archaea

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25781..28459
DNA (2679bp) protein (893aa)
alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=CG_Micra_05
Alanine--tRNA ligase n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BBG5_METIK
alanyl-tRNA synthetase
rifcsphigho2_01_scaffold_2877_24
unknown

Not on your lists

28593..29141
DNA (549bp) protein (183aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2877_25
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


29222..31942
DNA (2721bp) protein (907aa)
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=5240720 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=AR10
leucyl-tRNA synthetase (EC:6.1.1.4)
rifcsphigho2_01_scaffold_2877_26
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31943..33646)
DNA (1704bp) protein (568aa)
GTP pyrophosphokinase , (P)ppGpp synthetase I {ECO:0000313|EMBL:CCJ34682.1}; EC=2.7.6.5 {ECO:0000313|EMBL:CCJ34682.1};; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
GTP pyrophosphokinase , (P)ppGpp synthetase I n=1 Tax=Caloramator australicus RC3 RepID=I7KAB9_9CLOT
rifcsphigho2_01_scaffold_2877_27
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


comp(33695..35413)
DNA (1719bp) protein (573aa)
hypothetical protein; K01887 arginyl-tRNA synthetase [EC:6.1.1.19] id=5240721 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein; K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=AR10
hypothetical protein
rifcsphigho2_01_scaffold_2877_28
unknown

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35595..35960
DNA (366bp) protein (122aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2877_29
unknown

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comp(35943..36476)
DNA (534bp) protein (178aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2877_30
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(36567..37223)
DNA (657bp) protein (219aa)
Aquaporin Z n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IHF3_BEII9
Aquaporin Z {ECO:0000256|HAMAP-Rule:MF_01146}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
MIP family channel protein
Displaying items 1-30 of 33 in total

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