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rifcsphigho2_01_scaffold_10671

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_10671_1
unknown

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2..172
DNA (171bp) protein (57aa)

This feature has no annotations

rifcsphigho2_01_scaffold_10671_2
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(169..864)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZA4_METFV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP77636.1}; Flags: Precursor;; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source
rifcsphigho2_01_scaffold_10671_3

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871..1305
DNA (435bp) protein (145aa)
hypothetical protein; K09005 hypothetical protein id=5043697 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46673.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_01_scaffold_10671_4
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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1302..2384
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LLD1_THEBM
hypothetical protein Tax=CG_Aenigma_01
hypothetical protein
rifcsphigho2_01_scaffold_10671_5

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2419..2607
DNA (189bp) protein (63aa)
30S ribosomal protein S17e n=1 Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A1E5_FERFK
30S ribosomal protein S17e
30S ribosomal protein S17e {ECO:0000256|HAMAP-Rule:MF_00511, ECO:0000256|SAAS:SAAS00278999}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
rifcsphigho2_01_scaffold_10671_6

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2620..2913
DNA (294bp) protein (98aa)
Marine sediment metagenome DNA, contig: S01H1_S07743 {ECO:0000313|EMBL:GAG01145.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
DNA/RNA-binding protein Alba; K03622 archaea-specific DNA-binding protein id=5043654 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA/RNA-binding protein Alba
rifcsphigho2_01_scaffold_10671_7
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(2975..4705)
DNA (1731bp) protein (577aa)
sodium/hydrogen exchanger Tax=CG_Pacearch_04
Transporter, CPA2 family id=5799540 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
sodium/hydrogen exchanger
rifcsphigho2_01_scaffold_10671_8
CG_Omnitr_02, Omnitrophica, Bacteria

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comp(4850..5068)
DNA (219bp) protein (73aa)
BsaJI n=1 Tax=Geobacillus stearothermophilus RepID=E5LGC0_GEOSE
putative type II restriction enzyme Tax=CG_Omnitr_02
rifcsphigho2_01_scaffold_10671_9
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(5542..5865)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B6A49F
hypothetical protein Tax=CG_Woesearch_03
hypothetical protein
rifcsphigho2_01_scaffold_10671_10
unknown

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6076..6603
DNA (528bp) protein (176aa)

This feature has no annotations

rifcsphigho2_01_scaffold_10671_11
unknown

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6605..6922
DNA (318bp) protein (106aa)

This feature has no annotations

rifcsphigho2_01_scaffold_10671_12
unknown

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6950..7885
DNA (936bp) protein (312aa)

This feature has no annotations

rifcsphigho2_01_scaffold_10671_13
unknown

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7886..8128
DNA (243bp) protein (81aa)

This feature has no annotations

rifcsphigho2_01_scaffold_10671_14
R_OD1_Uhrbacteria_46_25, Uhrbacteria, Parcubacteria, Bacteria

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comp(8526..8840)
DNA (315bp) protein (105aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_46_25_curated
Histidine triad (HIT) protein id=4501555 bin=GWA2_OP3_52_12 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
histidine triad (HIT) protein
rifcsphigho2_01_scaffold_10671_15
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(8903..9490)
DNA (588bp) protein (196aa)
hydrolase related to 2-haloalkanoic acid dehalogenase; K01560 2-haloacid dehalogenase [EC:3.8.1.2] Tax=CG_Woesearch_03
hypothetical protein n=1 Tax=Saccharibacillus kuerlensis RepID=UPI00036FFD36
HAD-superfamily hydrolase, subfamily IA, variant 1
rifcsphigho2_01_scaffold_10671_16
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(9692..11230)
DNA (1539bp) protein (513aa)
glycyl-tRNA synthetase (EC:6.1.1.14)
hypothetical protein Tax=CG_Woesearch_03
Glycyl-tRNA synthetase id=5799897 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_10671_17

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comp(11227..11886)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003818B6E
Diphthamide synthase subunit {ECO:0000313|EMBL:KHO51464.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
diptheria toxin resistance protein required for diphthamide biosynthesis 1
rifcsphigho2_01_scaffold_10671_18
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(11941..12636)
DNA (696bp) protein (232aa)
Phosphoglycolate phosphatase {ECO:0000313|EMBL:EGK08705.1}; EC=3.1.3.18 {ECO:0000313|EMBL:EGK08705.1};; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmosp
Phosphoglycolate phosphatase n=1 Tax=Desmospora sp. 8437 RepID=F5SJK3_9BACL
rifcsphigho2_01_scaffold_10671_19
unknown

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comp(12620..13138)
DNA (519bp) protein (173aa)
ZPR1-like zinc finger protein n=2 Tax=Methanotorris RepID=F6BBD3_METIK id=5103036 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ZPR1-like zinc finger protein n=2 Tax=Methanotorris RepID=F6BBD3_METIK Tax=AR20
ZPR1-like protein zinc finger protein
rifcsphigho2_01_scaffold_10671_20
unknown

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13193..13483
DNA (291bp) protein (97aa)

This feature has no annotations

rifcsphigho2_01_scaffold_10671_21
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13478..13903)
DNA (426bp) protein (142aa)
hypothetical protein
id=5103013 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsphigho2_01_scaffold_10671_22
unknown

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comp(13933..14043)
DNA (111bp) protein (37aa)

This feature has no annotations

rifcsphigho2_01_scaffold_10671_23
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

14218..14697
DNA (480bp) protein (160aa)
hypothetical protein
id=5103449 Tax=CG_Pacearch_04
seg id=5041657 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_10671_24
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(14672..15328)
DNA (657bp) protein (219aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
endonuclease III n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B6CA7B
rifcsphigho2_01_scaffold_10671_25
AR15, Woesearchaeaota, DPANN, Archaea

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comp(15300..16073)
DNA (774bp) protein (258aa)
Putative membrane-associated protein/domain protein id=5799953 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Putative membrane-associated protein/domain protein Tax=AR15
putative membrane-associated protein/domain protein
rifcsphigho2_01_scaffold_10671_26
CG_Woesearch_02, Woesearchaeota, Archaea

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16165..17634
DNA (1470bp) protein (490aa)
hypothetical protein Tax=CG_Woesearch_02
Putative uncharacterized protein id=5799954 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_01_scaffold_10671_27
unknown

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17681..17896
DNA (216bp) protein (72aa)

This feature has no annotations

rifcsphigho2_01_scaffold_10671_28
unknown

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17886..18428
DNA (543bp) protein (181aa)
NEQ238 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MR9_NANEQ id=5103447 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
NEQ238 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MR9_NANEQ Tax=AR20
hypothetical protein
rifcsphigho2_01_scaffold_10671_29

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18505..19155
DNA (651bp) protein (217aa)
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=5049223 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Large subunit ribosomal protein L1 {ECO:0000313|EMBL:KHO45214.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L1
rifcsphigho2_01_scaffold_10671_30

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19157..20023
DNA (867bp) protein (289aa)
rplP0; acidic ribosomal protein P0; K02864 large subunit ribosomal protein L10 id=5047525 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rplP0; acidic ribosomal protein P0
Displaying items 1-30 of 40 in total

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