ggKbase home page

rifcsphigho2_01_scaffold_12239

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_12239_1
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(31..366)
DNA (336bp) protein (112aa)
rpl7ae; 50S ribosomal protein L7; K02936 large subunit ribosomal protein L7Ae Tax=CG_Woesearch_02
rpl7ae; 50S ribosomal protein L7; K02936 large subunit ribosomal protein L7Ae id=5045758 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rpl7ae; 50S ribosomal protein L7
rifcsphigho2_01_scaffold_12239_2
Vibrio ichthyoenteri, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(476..1024)
DNA (549bp) protein (183aa)
Putative acetyltransferase n=1 Tax=Vibrio ichthyoenteri ATCC 700023 RepID=F9RZ06_9VIBR
Putative acetyltransferase {ECO:0000313|EMBL:EGU46145.1}; TaxID=870968 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio ichthyoenteri ATCC 70
hypothetical protein
rifcsphigho2_01_scaffold_12239_3
R_RIF_OD1_11_46_22b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(1048..1512)
DNA (465bp) protein (155aa)
Putative uncharacterized protein id=3526831 bin=PER_GWC2_41_7 species=Anopheles darlingi genus=Anopheles taxon_order=Diptera taxon_class=Insecta phylum=Arthropoda tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
nuclear protein SET; K07117 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_46_22b_curated
rifcsphigho2_01_scaffold_12239_4
unknown

Not on your lists

comp(1869..2804)
DNA (936bp) protein (312aa)

This feature has no annotations

rifcsphigho2_01_scaffold_12239_5
unknown

Not on your lists

2898..3320
DNA (423bp) protein (141aa)

This feature has no annotations

rifcsphigho2_01_scaffold_12239_6
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3909..5120
DNA (1212bp) protein (404aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW92_9FIRM
rifcsphigho2_01_scaffold_12239_7
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5157..5567)
DNA (411bp) protein (137aa)
hypothetical protein id=5048321 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein Tax=AR18
hypothetical protein
rifcsphigho2_01_scaffold_12239_8
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

5670..6221
DNA (552bp) protein (184aa)
GrpE nucleotide exchange factor n=1 Tax=uncultured organism RepID=M1PV93_9ZZZZ
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE Tax=CG_Aenigma_01
Heat shock protein GrpE
rifcsphigho2_01_scaffold_12239_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

6199..8037
DNA (1839bp) protein (613aa)
dnaK; chaperone DnaK; K04043 molecular chaperone DnaK Tax=CG_Woesearch_02
dnaK; chaperone DnaK; K04043 molecular chaperone DnaK id=5048314 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
dnaK; molecular chaperone DnaK
rifcsphigho2_01_scaffold_12239_10

Not on your lists

8066..9181
DNA (1116bp) protein (372aa)
chaperone protein DnaJ; K03686 molecular chaperone DnaJ id=5048313 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Molecular chaperone DnaJ {ECO:0000313|EMBL:KHO54031.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
molecular chaperone DnaJ
rifcsphigho2_01_scaffold_12239_11
unknown

Not on your lists

comp(9204..9362)
DNA (159bp) protein (53aa)

This feature has no annotations

rifcsphigho2_01_scaffold_12239_12
unknown

Not on your lists

9458..10399
DNA (942bp) protein (314aa)
SpoVT/AbrB domain protein n=12 Tax=Sulfolobus RepID=C3MR72_SULIL id=5103746 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SpoVT/AbrB domain protein n=12 Tax=Sulfolobus RepID=C3MR72_SULIL Tax=AR20
SpoVT/AbrB protein
rifcsphigho2_01_scaffold_12239_13
unknown

Not on your lists

10435..11934
DNA (1500bp) protein (500aa)

This feature has no annotations

rifcsphigho2_01_scaffold_12239_14
unknown

Not on your lists

11990..12145
DNA (156bp) protein (52aa)

This feature has no annotations

rifcsphigho2_01_scaffold_12239_15
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

12183..12941
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003798972
hypothetical protein Tax=AR17
hypothetical protein
rifcsphigho2_01_scaffold_12239_16

Not on your lists

13109..14113
DNA (1005bp) protein (335aa)
ABC-type multidrug transport system, ATP-ase compoment CAC0241 n=2 Tax=Clostridium RepID=A0PYE1_CLONN id=5103647 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Antibiotic transport system ATP-binding protein {ECO:0000313|EMBL:KHO51914.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
ABC-type multidrug transport system, ATP-ase compoment
rifcsphigho2_01_scaffold_12239_17

Not on your lists

14106..15758
DNA (1653bp) protein (551aa)
ABC-2 type transporter n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EED0_9EURY id=5103646 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ABC-2 type transporter
ABC-2 type transporter {ECO:0000313|EMBL:AJF62927.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_12239_18
unknown

Not on your lists

15804..16169
DNA (366bp) protein (122aa)

This feature has no annotations

rifcsphigho2_01_scaffold_12239_19

Not on your lists

comp(16195..16848)
DNA (654bp) protein (218aa)
Threonyl/alanyl tRNA synthetase SAD n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R1R0_SPISS
Threonyl/alanyl tRNA synthetase SAD {ECO:0000313|EMBL:KHO51196.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
threonyl/alanyl tRNA synthetase SAD
rifcsphigho2_01_scaffold_12239_20

Not on your lists

comp(16894..18885)
DNA (1992bp) protein (664aa)
calcium-translocating P-type ATPase (EC:3.6.3.8); K01537 Ca2+-transporting ATPase [EC:3.6.3.8] id=5043592 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ca2+-transporting ATPase {ECO:0000313|EMBL:KHO46568.1}; EC=3.6.3.8 {ECO:0000313|EMBL:KHO46568.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Cation transport ATPase
Displaying 20 items

View Taxonomy