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rifcsphigho2_01_scaffold_3285

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_3285_1
unknown

Not on your lists

1..183
DNA (183bp) protein (61aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3285_2
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(191..1522)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HLI3_PYRSN
hypothetical protein; K03592 PmbA protein Tax=CG_Pacearch_04
hypothetical protein
rifcsphigho2_01_scaffold_3285_3
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(1526..2938)
DNA (1413bp) protein (471aa)
hypothetical protein; K03568 TldD protein Tax=CG_Pacearch_04
peptidase U62 modulator of DNA gyrase; K03568 TldD protein id=5046351 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
peptidase U62 modulator of DNA gyrase
rifcsphigho2_01_scaffold_3285_4
unknown

Not on your lists

comp(2977..3231)
DNA (255bp) protein (85aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3285_5
unknown

Not on your lists

comp(3245..3781)
DNA (537bp) protein (179aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3285_6
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

3896..4771
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00036BE10A
hypothetical protein Tax=RBG_13_Caldithrix_44_9_curated
hypothetical protein
rifcsphigho2_01_scaffold_3285_7
unknown

Not on your lists

4862..5089
DNA (228bp) protein (76aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3285_8
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

5079..6164
DNA (1086bp) protein (362aa)
ATPase, AAA-type, core id=5799675 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ATPase, AAA-type, core Tax=AR15
rifcsphigho2_01_scaffold_3285_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

6166..6915
DNA (750bp) protein (250aa)
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
Uncharacterized protein id=5799674 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_3285_10
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(6899..7462)
DNA (564bp) protein (188aa)
hypothetical protein Tax=CG_Woesearch_02
UPI00021A58A9 related cluster id=5800731 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_01_scaffold_3285_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(7467..8849)
DNA (1383bp) protein (461aa)
aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit b (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=CG_Woesearch_02
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VR83_METIM rbh
glutamyl-tRNA(Gln) amidotransferase, B subunit
rifcsphigho2_01_scaffold_3285_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(8846..10189)
DNA (1344bp) protein (448aa)
glutamyl-tRNA(gln) amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=CG_Woesearch_02
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=GATA_METJA
glutamyl-tRNA(Gln) amidotransferase, A subunit
rifcsphigho2_01_scaffold_3285_13
unknown

Not on your lists

comp(10186..10410)
DNA (225bp) protein (75aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3285_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


comp(10431..11765)
DNA (1335bp) protein (445aa)
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RBG_13_Woesearchaeota_36_6_curated
Aspartyl-tRNA synthetase n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L667_KORCO
aspartyl-tRNA synthetase
rifcsphigho2_01_scaffold_3285_15

Not on your lists

comp(11767..12327)
DNA (561bp) protein (187aa)
Translin {ECO:0000313|EMBL:KHO51314.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein id=5047338 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
haloacid dehalogenase superfamily protein
rifcsphigho2_01_scaffold_3285_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

12470..13678
DNA (1209bp) protein (403aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5048642 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_01_scaffold_3285_17

Not on your lists

comp(13796..14413)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D7941
Transcription factor E
Transcription factor E {ECO:0000256|SAAS:SAAS00008967}; Flags: Fragment;; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
rifcsphigho2_01_scaffold_3285_18

Not on your lists

14537..15013
DNA (477bp) protein (159aa)
hypothetical protein
coiled-coil id=5044072 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54634.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsphigho2_01_scaffold_3285_19
unknown

Not on your lists

15010..15369
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003753781
hypothetical protein
rifcsphigho2_01_scaffold_3285_20

Not on your lists

15456..17963
DNA (2508bp) protein (836aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] id=5043002 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
alaS; alanine--tRNA ligase/alanyl-tRNA synthetase (EC:6.1.1.7)
rifcsphigho2_01_scaffold_3285_21

Not on your lists

comp(18010..18300)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LIR6_THEBM id=5103832 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF63110.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_3285_22
RHI_RIF_OD1_01_48_17, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(18316..18843)
DNA (528bp) protein (176aa)
inorganic diphosphatase; K01507 inorganic pyrophosphatase [EC:3.6.1.1] Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_01_48_17_curated
ppa; inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA36_GEMAT
rifcsphigho2_01_scaffold_3285_23
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(18966..19922)
DNA (957bp) protein (319aa)
AsnC/Lrp family transcriptional regulator Tax=RBG_13_Pacearchaeota_36_9_curated
AsnC/Lrp family transcriptional regulator id=5049211 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
rifcsphigho2_01_scaffold_3285_24
unknown

Not on your lists

20049..20405
DNA (357bp) protein (119aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3285_25
unknown

Not on your lists

20415..21302
DNA (888bp) protein (296aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3285_26
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(21450..21752)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003770312
hypothetical protein Tax=CG_Pacearch_05
rifcsphigho2_01_scaffold_3285_27
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21804..24476)
DNA (2673bp) protein (891aa)
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=523846 species="Archaea; Euryarch
Leucine--tRNA ligase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZ23_METFV
rifcsphigho2_01_scaffold_3285_28
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24498..29318)
DNA (4821bp) protein (1607aa)
Putative lipoprotein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G1K3_9DELT
hypothetical protein
hypothetical protein Tax=RifOxyA12_full_Proteobacteria_58_15_curated
rifcsphigho2_01_scaffold_3285_29
unknown

Not on your lists

comp(29320..29823)
DNA (504bp) protein (168aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3285_30
unknown

Not on your lists

comp(30129..31496)
DNA (1368bp) protein (456aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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