ggKbase home page

rifcsphigho2_01_scaffold_20823

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_20823_1
Clostridium sp. CAG:780, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..2810
DNA (2808bp) protein (936aa)
Soluble lytic murein transglycosylase-like protein n=1 Tax=Clostridium sp. CAG:780 RepID=R5Q9T6_9CLOT
Soluble lytic murein transglycosylase-like protein {ECO:0000313|EMBL:CCZ17887.1}; TaxID=1262839 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental sam
Lytic transglycosylase catalytic
rifcsphigho2_01_scaffold_20823_2
unknown

Not on your lists

2986..3801
DNA (816bp) protein (272aa)

This feature has no annotations

rifcsphigho2_01_scaffold_20823_3
unknown

Not on your lists

comp(3798..4325)
DNA (528bp) protein (176aa)

This feature has no annotations

rifcsphigho2_01_scaffold_20823_4
unknown

Not on your lists

4399..4758
DNA (360bp) protein (120aa)

This feature has no annotations

rifcsphigho2_01_scaffold_20823_5

Not on your lists

comp(4938..5165)
DNA (228bp) protein (76aa)
Like-Sm ribonucleoprotein core n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEN0_9EURY id=5103084 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Like-Sm ribonucleoprotein core
Like-Sm ribonucleoprotein core {ECO:0000313|EMBL:AJF62365.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_20823_6

Not on your lists

5263..5646
DNA (384bp) protein (128aa)
SSU ribosomal protein s8e; K02995 small subunit ribosomal protein S8e id=5048696 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S8e {ECO:0000256|HAMAP-Rule:MF_00029, ECO:0000256|SAAS:SAAS00018121}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
30S ribosomal protein S8e
rifcsphigho2_01_scaffold_20823_7
unknown

Not on your lists

5750..6148
DNA (399bp) protein (133aa)

This feature has no annotations

rifcsphigho2_01_scaffold_20823_8
unknown

Not on your lists

6154..6522
DNA (369bp) protein (123aa)

This feature has no annotations

rifcsphigho2_01_scaffold_20823_9
unknown

Not on your lists

6509..6967
DNA (459bp) protein (153aa)

This feature has no annotations

rifcsphigho2_01_scaffold_20823_10
unknown

Not on your lists

comp(7155..7607)
DNA (453bp) protein (151aa)

This feature has no annotations

rifcsphigho2_01_scaffold_20823_11
unknown

Not on your lists

7775..8692
DNA (918bp) protein (306aa)
Transcription initiation factor IIB n=4 Tax=Archaeoglobaceae RepID=TF2B_ARCFU id=5103059 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcription initiation factor IIB n=4 Tax=Archaeoglobaceae RepID=TF2B_ARCFU Tax=AR20
Transcription initiation factor IIB
rifcsphigho2_01_scaffold_20823_12

Not on your lists

8694..9551
DNA (858bp) protein (286aa)
transmembrane_regions 20..37 id=23528 bin=ACD22 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=ACD22 organism_group=WWE3 organism_desc=WWE3
Uncharacterized protein {ECO:0000313|EMBL:EKD99929.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rifcsphigho2_01_scaffold_20823_13
unknown

Not on your lists

comp(9548..10441)
DNA (894bp) protein (298aa)
RNAse Z n=1 Tax=nanoarchaeote Nst1 RepID=R1E5I6_9ARCH id=5103055 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RNAse Z n=1 Tax=nanoarchaeote Nst1 RepID=R1E5I6_9ARCH Tax=AR20
RNAse Z
rifcsphigho2_01_scaffold_20823_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

10487..11044
DNA (558bp) protein (186aa)
tRNA-splicing endonuclease subunit alpha (EC:3.1.27.9); K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] Tax=CG_Woesearch_02
tRNA-intron endonuclease n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EE73_9EURY id=5103054 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
tRNA-intron endonuclease
rifcsphigho2_01_scaffold_20823_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

11100..11888
DNA (789bp) protein (263aa)
hypothetical protein
Putative uncharacterized protein Tax=CG_Woesearch_02
id=5103053 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Displaying 15 items

View Taxonomy