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rifcsphigho2_01_scaffold_35041

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_35041_1
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1..1149)
DNA (1149bp) protein (383aa)
PDK repeat-containing protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TVA1_9EURY
PDK repeat-containing protein {ECO:0000313|EMBL:EMR73821.1}; TaxID=1198116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-N05.;"
lipoprotein
rifcsphigho2_01_scaffold_35041_2

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comp(1190..1678)
DNA (489bp) protein (163aa)
50S ribosomal protein L15e; K02877 large subunit ribosomal protein L15e id=5042106 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Large subunit ribosomal protein L15e {ECO:0000313|EMBL:KHO48059.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
50S ribosomal protein L15e
rifcsphigho2_01_scaffold_35041_3
AR5, Aenigmarchaeota, DPANN, Archaea

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1742..2023
DNA (282bp) protein (94aa)
transmembrane_regions id=18248057 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
transmembrane_regions Tax=AR5
rifcsphigho2_01_scaffold_35041_4

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2068..3246
DNA (1179bp) protein (393aa)
Putative uncharacterized protein id=4318180 bin=PER_GWC2_41_7 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Uncharacterized protein {ECO:0000313|EMBL:CEG11825.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
hypothetical protein
rifcsphigho2_01_scaffold_35041_5
AR5, Aenigmarchaeota, DPANN, Archaea

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3374..3652
DNA (279bp) protein (93aa)
hypothetical protein id=18248060 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein Tax=AR5
hypothetical protein
rifcsphigho2_01_scaffold_35041_6
PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, Peregrinibacteria, Bacteria

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3702..4157
DNA (456bp) protein (152aa)
id=4318178 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
id=4318178 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_01_scaffold_35041_7
RHI_OD1_Moranbacteria_40_10, Moranbacteria, Parcubacteria, Bacteria

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4157..4303
DNA (147bp) protein (49aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OD1_Moranbacteria_40_10_curated
rifcsphigho2_01_scaffold_35041_8
R_RIF_OD1_11_46_13, RIF-OD1-11, Parcubacteria, Bacteria

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comp(4306..4878)
DNA (573bp) protein (191aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_46_13_curated
rifcsphigho2_01_scaffold_35041_9
R_OD1_Falkowbacteria_39_33, Falkowbacteria, Parcubacteria, Bacteria

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4968..5129
DNA (162bp) protein (54aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Falkowbacteria_39_33_curated
rifcsphigho2_01_scaffold_35041_10
Methanolacinia petrolearia, Methanolacinia, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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5158..5913
DNA (756bp) protein (252aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=679926 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobi
DNA methylase N-4/N-6 domain protein n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RFD1_METP4
DNA methylase N-4/N-6 domain-containing protein
rifcsphigho2_01_scaffold_35041_11
GWC1_CPR1_49_13, CPR1, Bacteria

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comp(5904..6401)
DNA (498bp) protein (166aa)
R.RsaI endonuclease n=1 Tax=Rhodobacter sphaeroides RepID=Q6SA27_RHOSH
R.RsaI endonuclease Tax=GWC1_CPR1_49_13
rifcsphigho2_01_scaffold_35041_12
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(6456..6653)
DNA (198bp) protein (66aa)
arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=AR5
Arginine--tRNA ligase id=4318175 bin=PER_GWC2_41_7 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Arginyl-tRNA synthetase
Displaying 12 items

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