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rifcsplowo2_01_scaffold_17121

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_17121_1
AR18, Woesearchaeaota, DPANN, Archaea

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comp(3..206)
DNA (204bp) protein (68aa)
id=5049642 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=AR18
rifcsplowo2_01_scaffold_17121_2
unknown

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comp(224..676)
DNA (453bp) protein (151aa)

This feature has no annotations

rifcsplowo2_01_scaffold_17121_3

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863..1315
DNA (453bp) protein (151aa)
30S ribosomal protein S13 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS13_NANEQ id=5103690 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_17121_4
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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1318..1872
DNA (555bp) protein (185aa)
30S ribosomal protein S4 n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BD43_METIK
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanoto
rifcsplowo2_01_scaffold_17121_5
CG_Woesearch_01, Woesearchaeota, Archaea

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1865..2281
DNA (417bp) protein (139aa)
rps11p; 30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=CG_Woesearch_01
rps11p; 30S ribosomal protein S11P; K02948 small subunit ribosomal protein S11 id=5051521 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rps11p; 30S ribosomal protein S11P
rifcsplowo2_01_scaffold_17121_6

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2284..3060
DNA (777bp) protein (259aa)
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] id=5049647 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
DNA-directed RNA polymerase subunit D
rifcsplowo2_01_scaffold_17121_7

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3057..3404
DNA (348bp) protein (116aa)
50S ribosomal protein L18e n=2 Tax=Staphylothermus RepID=A3DMQ7_STAMF id=5103681 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L18e
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_17121_8
AR18, Woesearchaeaota, DPANN, Archaea

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3401..3814
DNA (414bp) protein (138aa)
rpl13p; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 id=5048339 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rpl13p; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=AR18
50S ribosomal protein L13P
rifcsplowo2_01_scaffold_17121_9
AR18, Woesearchaeaota, DPANN, Archaea

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3811..4212
DNA (402bp) protein (134aa)
50S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=5048340 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=AR18
30S ribosomal protein S9
rifcsplowo2_01_scaffold_17121_10
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(4316..4708)
DNA (393bp) protein (131aa)
Transposase-like protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BIU2_9EURY
Transposase-like protein
Transposase-like protein {ECO:0000313|EMBL:AGK60045.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfatical
rifcsplowo2_01_scaffold_17121_11

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4814..5077
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=unclassified Euryarchaeota (miscellaneous) RepID=UPI0003760CBB
Uncharacterized protein {ECO:0000313|EMBL:KKN64111.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase
rifcsplowo2_01_scaffold_17121_12
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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5074..5922
DNA (849bp) protein (283aa)
Transposase n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMK5_METH6
transposase
Tax=BJP_IG2158_Thermoplasmatales_53_16
rifcsplowo2_01_scaffold_17121_13
unknown

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5975..6460
DNA (486bp) protein (162aa)

This feature has no annotations

rifcsplowo2_01_scaffold_17121_14

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6555..8060
DNA (1506bp) protein (502aa)
Phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] id=5044139 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00282}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00282};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00282}
Phenylalanine-tRNA ligase alpha subunit
rifcsplowo2_01_scaffold_17121_15

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8054..9709
DNA (1656bp) protein (552aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284};
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZPR9_THELI id=5103639 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Phenylalanine-tRNA ligase beta subunit
rifcsplowo2_01_scaffold_17121_16
unknown

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comp(9941..10111)
DNA (171bp) protein (57aa)

This feature has no annotations

Displaying 16 items

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