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rifcsplowo2_01_scaffold_9782

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_9782_1
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(1..339)
-----------------
DNA (339bp)
protein (113aa)
Elongation factor 2 n=6 Tax=Methanocaldococcus RepID=EF2_METJA id=5103761 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
translation elongation factor aEF-2; K03234 elongation factor 2 Tax=AR6
Elongation factor 2
rifcsplowo2_01_scaffold_9782_2
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(459..1952)
-----------------
DNA (1494bp)
protein (498aa)
translation elongation factor aEF-2; K03234 elongation factor 2 Tax=AR6
Elongation factor 2
fusA; elongation factor EF-2; K03234 elongation factor 2 id=5043960 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_9782_3
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(2160..2531)
-----------------
DNA (372bp)
protein (124aa)
hypothetical protein
PIN domain-like id=5241235 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR6
rifcsplowo2_01_scaffold_9782_4
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(2551..2772)
-----------------
DNA (222bp)
protein (74aa)
hypothetical protein
AbrB/MazE/MraZ-like id=5241236 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR6
rifcsplowo2_01_scaffold_9782_5
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(2818..3405)
-----------------
DNA (588bp)
protein (196aa)
30S ribosomal protein S7 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS7_NANEQ
30S ribosomal protein S7P; K02992 small subunit ribosomal protein S7 Tax=AR6
30S ribosomal protein S7P
rifcsplowo2_01_scaffold_9782_6

Not on your lists


comp(3419..3841)
-----------------
DNA (423bp)
protein (141aa)
30S ribosomal protein S12 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RS12_METKA id=5103768 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S12 {ECO:0000256|RuleBase:RU004490}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
30S ribosomal protein S12
rifcsplowo2_01_scaffold_9782_7
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

3989..5149
-----------------
DNA (1161bp)
protein (387aa)
hypothetical protein n=3 Tax=candidate division KSB1 RepID=UPI0003730F20
hypothetical protein Tax=AR6
hypothetical protein
rifcsplowo2_01_scaffold_9782_8
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(5193..5603)
-----------------
DNA (411bp)
protein (137aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374B7B8
transcription elongation factor NusA-like protein; K02600 N utilization substance protein A Tax=AR6
NusA family KH domain-containing protein
rifcsplowo2_01_scaffold_9782_9
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(5769..6035)
-----------------
DNA (267bp)
protein (89aa)
hypothetical protein; K02908 large subunit ribosomal protein L30e id=5043968 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L7Ae/L30e/S12e/Gadd45; K02908 large subunit ribosomal protein L30e
Tax=AR6
rifcsplowo2_01_scaffold_9782_10
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(6051..6317)
-----------------
DNA (267bp)
protein (89aa)
Tax=AR6
rifcsplowo2_01_scaffold_9782_11
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(6352..9801)
-----------------
DNA (3450bp)
protein (1150aa)
DNA-directed RNA polymerase, subunit a' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] Tax=AR6
DNA-directed RNA polymerase id=5800702 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase
rifcsplowo2_01_scaffold_9782_12
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(9873..13160)
-----------------
DNA (3288bp)
protein (1096aa)
rpoB; DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] Tax=AR6
DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A209_THEGJ
rifcsplowo2_01_scaffold_9782_13
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(13286..13498)
-----------------
DNA (213bp)
protein (71aa)
DNA-directed RNA polymerase, subunit H (EC:2.7.7.6); K03053 DNA-directed RNA polymerase subunit H [EC:2.7.7.6] Tax=AR6
DNA-directed RNA polymerase, subunit H n=1 Tax=nanoarchaeote Nst1 RepID=R1E493_9ARCH id=5103780 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase, subunit H
rifcsplowo2_01_scaffold_9782_14
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(13644..14456)
-----------------
DNA (813bp)
protein (271aa)
Tax=AR6
rifcsplowo2_01_scaffold_9782_15

Not on your lists

comp(14713..15198)
-----------------
DNA (486bp)
protein (162aa)
Putative uncharacterized protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F172_SPHCR
Marine sediment metagenome DNA, contig: S01H4_L07826 {ECO:0000313|EMBL:GAG78660.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
rifcsplowo2_01_scaffold_9782_16
unknown

Not on your lists

comp(15208..15351)
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9782_17
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

15628..15867
-----------------
DNA (240bp)
protein (80aa)
Tax=AR6
rifcsplowo2_01_scaffold_9782_18
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

15889..16872
-----------------
DNA (984bp)
protein (328aa)
fabH; beta-ketoacyl-ACP synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=AR6
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=2 Tax=Listeria fleischmannii RepID=H7F8X4_9LIST
fabH; beta-ketoacyl-ACP synthase III
rifcsplowo2_01_scaffold_9782_19
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(16896..17336)
-----------------
DNA (441bp)
protein (147aa)
Tax=AR6
rifcsplowo2_01_scaffold_9782_20
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(17354..17686)
-----------------
DNA (333bp)
protein (111aa)
hypothetical protein; K09005 hypothetical protein id=5045955 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Hypothetical protein
Tax=AR6
rifcsplowo2_01_scaffold_9782_21
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(17655..18041)
-----------------
DNA (387bp)
protein (129aa)
Tax=AR6
rifcsplowo2_01_scaffold_9782_22
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

18117..18764
-----------------
DNA (648bp)
protein (216aa)
Tax=AR6
rifcsplowo2_01_scaffold_9782_23
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(18787..19494)
-----------------
DNA (708bp)
protein (236aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DV73_DESRL
hypothetical protein; K07043 Tax=AR6
hypothetical protein
rifcsplowo2_01_scaffold_9782_24
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(19547..20092)
-----------------
DNA (546bp)
protein (182aa)
Tax=AR6
rifcsplowo2_01_scaffold_9782_25
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(20127..20804)
-----------------
DNA (678bp)
protein (226aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4C070_METCG
ppiA; peptidyl-prolyl cis-trans isomerase Tax=AR6
ppiA; peptidyl-prolyl cis-trans isomerase
rifcsplowo2_01_scaffold_9782_26
unknown

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comp(20801..20971)
-----------------
DNA (171bp)
protein (57aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9782_27
unknown

Not on your lists

comp(21064..21174)
-----------------
DNA (111bp)
protein (37aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9782_28
CG_Elusi_02, Elusimicrobia, Bacteria

Not on your lists

comp(21276..21686)
-----------------
DNA (411bp)
protein (137aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037058C3
putative toxin-antitoxin system toxin component, PIN family Tax=CG_Elusi_02
putative toxin-antitoxin system toxin component, PIN family
rifcsplowo2_01_scaffold_9782_29

Not on your lists

comp(21679..21924)
-----------------
DNA (246bp)
protein (82aa)
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:KHO53471.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
SpoVT/AbrB family transcription regulator id=5044907 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_9782_30
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(21995..22237)
-----------------
DNA (243bp)
protein (81aa)
50S ribosomal subunit maturation GTPase; K06948 Tax=AR19
GTP-binding protein YlqF; K06948 id=5047469 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal subunit maturation GTPase RbgA
Displaying items 1-30 of 31 in total

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