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rifcsplowo2_01_scaffold_4795

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_4795_1

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3..584
DNA (582bp) protein (194aa)
Marine sediment metagenome DNA, contig: S01H1_L00509 {ECO:0000313|EMBL:GAF84275.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_01_scaffold_4795_2
AR11, Woesearchaeaota, DPANN, Archaea

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631..1203
DNA (573bp) protein (191aa)
hypothetical protein Tax=AR11
hypothetical protein id=5048442 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Peptidase M50 (modular protein)
rifcsplowo2_01_scaffold_4795_3
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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1205..2269
DNA (1065bp) protein (355aa)
gcvT; glycine cleavage system T protein (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
putative aminomethyltransferase (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] id=14425044 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin1_lowGC organism_group=Unknown_CP
folate-binding protein YgfZ (EC:2.1.2.10)
rifcsplowo2_01_scaffold_4795_4
unknown

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comp(2254..3873)
DNA (1620bp) protein (540aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4795_5

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4176..5564
DNA (1389bp) protein (463aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227};
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthetase n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B51BBE
rifcsplowo2_01_scaffold_4795_6
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5851..6237)
DNA (387bp) protein (129aa)
methionine-R-sulfoxide reductase (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E729_METEZ
rifcsplowo2_01_scaffold_4795_7

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comp(6241..6657)
DNA (417bp) protein (139aa)
hypothetical protein id=12598 bin=ACD17 species=ACD17 genus=ACD17 taxon_order=ACD17 taxon_class=ACD17 phylum=Clamydiae tax=ACD17 organism_group=Chlamydiae organism_desc=CvE6
Uncharacterized protein {ECO:0000313|EMBL:EKE07834.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
rifcsplowo2_01_scaffold_4795_8
R_WWE3_40_23, WWE3, Bacteria

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6740..7150
DNA (411bp) protein (137aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_WWE3_40_23_curated
rifcsplowo2_01_scaffold_4795_9
CG_Woesearch_02, Woesearchaeota, Archaea

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7451..8383
DNA (933bp) protein (311aa)
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF Tax=CG_Woesearch_02
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=5048448 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Protein-export membrane protein SecF
rifcsplowo2_01_scaffold_4795_10
AR11, Woesearchaeaota, DPANN, Archaea

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8346..10112
DNA (1767bp) protein (589aa)
hypothetical protein; K03072 preprotein translocase subunit SecD Tax=AR11
hypothetical protein; K03072 preprotein translocase subunit SecD id=5047439 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
SecD/SecF/SecDF export membrane protein
rifcsplowo2_01_scaffold_4795_11

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10169..10528
DNA (360bp) protein (120aa)
hypothetical protein id=5047440 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO45258.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
rifcsplowo2_01_scaffold_4795_12
AR11, Woesearchaeaota, DPANN, Archaea

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10488..10880
DNA (393bp) protein (131aa)
Putative uncharacterized protein Tax=AR11
hypothetical protein id=5048451 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_4795_13
CG_PER_02, Peregrinibacteria, Bacteria

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comp(10898..11857)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Eudoraea adriatica RepID=UPI0003774569
calcium/sodium:proton antiporter; K07301 inner membrane protein Tax=CG_PER_02
hypothetical protein
rifcsplowo2_01_scaffold_4795_14
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(11945..13192)
DNA (1248bp) protein (416aa)
Putative transporter (NRAMP family) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8Z5_UNCMA
Mn2+/Fe2_ transporter, NRAMP family Tax=CG_Woesearch_01
transport protein
rifcsplowo2_01_scaffold_4795_15
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(13176..14471)
DNA (1296bp) protein (432aa)
Predicted cation transporter n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8Z6_UNCMA
Mg/Co/Ni transporter MgtE domain-containing protein Tax=CG_Woesearch_01
cation transporter
rifcsplowo2_01_scaffold_4795_16

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14580..15254
DNA (675bp) protein (225aa)
Uridylate kinase {ECO:0000256|SAAS:SAAS00055191}; EC=2.7.4.22 {ECO:0000256|SAAS:SAAS00055199};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Uncharacterized protein id=5800565 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
uridylate kinase
rifcsplowo2_01_scaffold_4795_17
unknown

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15276..15524
DNA (249bp) protein (83aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4795_18
AR11, Woesearchaeaota, DPANN, Archaea

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comp(15681..16190)
DNA (510bp) protein (170aa)
Tax=AR11
rifcsplowo2_01_scaffold_4795_19

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comp(16228..16563)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XTJ9_9FIRM
Marine sediment metagenome DNA, contig: S01H1_S22577 {ECO:0000313|EMBL:GAG25338.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
rifcsplowo2_01_scaffold_4795_20

Not on your lists

comp(16575..18245)
DNA (1671bp) protein (557aa)
ABC-1 domain protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QVJ5_ACEAZ
ABC-1 protein {ECO:0000313|EMBL:KHO53628.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
ABC transporter
rifcsplowo2_01_scaffold_4795_21
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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comp(18385..18687)
DNA (303bp) protein (101aa)
CutA1 divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein Tax=RBG_13_Nitrospirae_43_8_curated
CutA1 divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein id=16545 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
periplasmic divalent cation tolerance protein CutA
rifcsplowo2_01_scaffold_4795_22
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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18811..19551
DNA (741bp) protein (247aa)
Nop58p-like pre mRNA splicing protein Tax=GWA2_OD1_40_9
hypothetical protein; K14564 nucleolar protein 56 id=5048459 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_4795_23
CG_Woesearch_02, Woesearchaeota, Archaea

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19561..20238
DNA (678bp) protein (226aa)
fibrillarin Tax=CG_Woesearch_02
fibrillarin; K04795 fibrillarin-like pre-rRNA processing protein id=5048460 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
fibrillarin
rifcsplowo2_01_scaffold_4795_24
unknown

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20307..20675
DNA (369bp) protein (123aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4795_25
Marinitoga piezophila, Marinitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

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20691..21560
DNA (870bp) protein (290aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J822_MARPK
pyridoxal 5''-phosphate synthase, synthase subunit Pdx1
rifcsplowo2_01_scaffold_4795_26
unknown

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21561..21905
DNA (345bp) protein (115aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4795_27
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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21908..22540
DNA (633bp) protein (211aa)
glutamine amidotransferase subunit PdxT; K08681 glutamine amidotransferase [EC:2.6.-.-] Tax=RBG_16_KB1_OP1_55_9_curated
Glutamine amidotransferase subunit PdxT n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SJJ5_9BACT
glutamine amidotransferase subunit PdxT
rifcsplowo2_01_scaffold_4795_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(22558..24009)
DNA (1452bp) protein (484aa)
Aspartate ammonia-lyase {ECO:0000313|EMBL:KCZ73007.1}; EC=4.3.1.1 {ECO:0000313|EMBL:KCZ73007.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanop
aspartate ammonia-lyase (EC:4.3.1.1)
Fumarate hydratase class II id=1874346 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
rifcsplowo2_01_scaffold_4795_29
R_OP11_Levybacteria_36_15, Levybacteria, Microgenomates, Bacteria

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comp(24011..25198)
DNA (1188bp) protein (396aa)
malate dehydrogenase; K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_36_15_curated
malate dehydrogenase oxaloacetate-decarboxylating (EC:1.1.1.38)
Malate dehydrogenase (Oxaloacetate-decarboxylating) id=2698727 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsplowo2_01_scaffold_4795_30
AR11, Woesearchaeaota, DPANN, Archaea

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comp(25201..26601)
DNA (1401bp) protein (467aa)
pykF; pyruvate kinase (EC:2.7.1.40)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002F0EF44
Pyruvate kinase Tax=AR11
Displaying items 1-30 of 38 in total

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