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rifcsplowo2_01_scaffold_20497

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_20497_1

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comp(3..344)
DNA (342bp) protein (114aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] id=5045777 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Marine sediment metagenome DNA, contig: S12H4_L00508 {ECO:0000313|EMBL:GAI76540.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B
rifcsplowo2_01_scaffold_20497_2

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comp(488..871)
DNA (384bp) protein (128aa)
id=5048666 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45329.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_20497_3

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comp(956..1261)
DNA (306bp) protein (102aa)
seg id=5043584 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46560.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_20497_4

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1367..1738
DNA (372bp) protein (124aa)
hypothetical protein id=5043583 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46559.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_20497_5

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comp(1786..3213)
DNA (1428bp) protein (476aa)
Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A {ECO:0000313|EMBL:KHO51304.1}; EC=6.3.5.6 {ECO:0000313|EMBL:KHO51304.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A (EC:6.3.5.6)
Glutamyl-tRNA(Gln) amidotransferase subunit A id=5799876 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_20497_6

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comp(3220..3783)
DNA (564bp) protein (188aa)
hypothetical protein id=13010 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
Uncharacterized protein {ECO:0000313|EMBL:EKE06880.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Major facilitator superfamily MFS_1
rifcsplowo2_01_scaffold_20497_7

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comp(3785..4069)
DNA (285bp) protein (95aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (EC:6.3.5.6)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C id=5799877 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_20497_8
AR11, Woesearchaeaota, DPANN, Archaea

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comp(4246..4824)
DNA (579bp) protein (193aa)
id=5045972 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
rifcsplowo2_01_scaffold_20497_9

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comp(4826..5398)
DNA (573bp) protein (191aa)
DITP/XTP pyrophosphatase {ECO:0000313|EMBL:KHO51307.1}; EC=3.6.1.19 {ECO:0000313|EMBL:KHO51307.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZH4_METFV
rifcsplowo2_01_scaffold_20497_10
unknown

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comp(5687..6295)
DNA (609bp) protein (203aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20497_11
Parcubacteria bacterium GW2011_GWA1_42_7, Parcubacteria, Bacteria

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comp(6338..6631)
DNA (294bp) protein (98aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS70040.1}; TaxID=1618785 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_42_7.;"
hypothetical protein id=18248133 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
rifcsplowo2_01_scaffold_20497_12
RBG_13_OD1_Falkowbacteria_39_9_curated, Falkowbacteria, Parcubacteria, Bacteria

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6786..7652
DNA (867bp) protein (289aa)
Tax=RBG_13_OD1_Falkowbacteria_39_9_curated
rifcsplowo2_01_scaffold_20497_13
Parcubacteria bacterium GW2011_GWA1_42_7, Parcubacteria, Bacteria

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7649..7984
DNA (336bp) protein (112aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS70041.1}; TaxID=1618785 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_42_7.;"
hypothetical protein id=18248134 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
rifcsplowo2_01_scaffold_20497_14
CG_Woesearch_01, Woesearchaeota, Archaea

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8164..8754
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003816AF2
hypothetical protein
hypothetical protein Tax=CG_Woesearch_01
rifcsplowo2_01_scaffold_20497_15
CG_Woesearch_02, Woesearchaeota, Archaea

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8755..9081
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003707988
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein
Displaying 15 items

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