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rifcsplowo2_01_scaffold_8873

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_8873_1
unknown

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comp(3..536)
DNA (534bp) protein (178aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8873_2
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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676..1056
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W4H8_UNCMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ36715.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae
rifcsplowo2_01_scaffold_8873_3

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1032..1352
DNA (321bp) protein (107aa)
Nucleotidyltransferase n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9UYZ8_PYRAB
Uncharacterized protein {ECO:0000313|EMBL:KHO49749.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
hypothetical protein
rifcsplowo2_01_scaffold_8873_4

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1720..2256
DNA (537bp) protein (179aa)
PE-PGRS family protein n=2 Tax=Mycobacterium RepID=B2HLL6_MYCMM id=5103305 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62587.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_8873_5
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

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2253..4547
DNA (2295bp) protein (765aa)
viral A-type inclusion protein Tax=RBG_13_Euryarchaeota_57_23_curated
id=5046765 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_8873_6
CG_Woesearch_02, Woesearchaeota, Archaea

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4600..5871
DNA (1272bp) protein (424aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=CG_Woesearch_02
Serine--tRNA ligase id=5800580 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
seryl-tRNA synthetase
rifcsplowo2_01_scaffold_8873_7
unknown

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5883..6356
DNA (474bp) protein (158aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8873_8
unknown

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6445..7098
DNA (654bp) protein (218aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8873_9
CG_Woesearch_02, Woesearchaeota, Archaea

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7146..8219
DNA (1074bp) protein (358aa)
cell division control protein 6 Tax=CG_Woesearch_02
ORC1-type DNA replication protein id=5800648 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ORC1-type DNA replication protein
rifcsplowo2_01_scaffold_8873_10
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(8230..8622)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T678_9EURY
hypothetical protein
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsplowo2_01_scaffold_8873_11
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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comp(8697..11837)
DNA (3141bp) protein (1047aa)
B12-dependent ribonucleoside diphosphate reductase, ribonucleoside-diphosphate reductase alpha chain {ECO:0000313|EMBL:KKP37149.1}; EC=1.17.4.1 {ECO:0000313|EMBL:KKP37149.1};; TaxID=1619065 species="B
B12-dependent ribonucleoside diphosphate reductase; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] id=5095104 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome rbh
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
rifcsplowo2_01_scaffold_8873_12
R_SM2F11_46_11, SM2F11, Bacteria

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12289..12612
DNA (324bp) protein (108aa)
Thioredoxin n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFE9_9BACT
thioredoxin; K03671 thioredoxin 1 Tax=RIFCSPHIGHO2_02_FULL_SM2F11_46_11_curated
trxA; thioredoxin 1, redox factor
rifcsplowo2_01_scaffold_8873_13

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comp(12702..13364)
DNA (663bp) protein (221aa)
HAD-superfamily hydrolase n=1 Tax=mine drainage metagenome RepID=T1AJV6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KKN08664.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
uncharacterized LOC101210563
rifcsplowo2_01_scaffold_8873_14
R_WOR_2_63_39, WOR-2, Bacteria

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comp(13364..13675)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8L0A5_PARAV
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_63_39_curated
rifcsplowo2_01_scaffold_8873_15
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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13682..14341
DNA (660bp) protein (220aa)
Metallo-beta-lactamase family protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YL18_THEYD
metallo-beta-lactamase family protein
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:ACI20876.1}; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yell
rifcsplowo2_01_scaffold_8873_16

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comp(14353..14613)
DNA (261bp) protein (87aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKN87590.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
coiled-coil 3..24 id=73727 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
Displaying 16 items

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