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rifcsplowo2_01_scaffold_9871

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_9871_1

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comp(1..549)
DNA (549bp) protein (183aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] id=73268 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
thioredoxin reductase NADPH (EC:1.8.1.9)
Uncharacterized protein {ECO:0000313|EMBL:EKD63686.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rifcsplowo2_01_scaffold_9871_2
unknown

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665..982
DNA (318bp) protein (106aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9871_3

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1199..4108
DNA (2910bp) protein (970aa)
Isoleucyl-tRNA synthetase {ECO:0000313|EMBL:KHO51441.1}; EC=6.1.1.5 {ECO:0000313|EMBL:KHO51441.1};; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase id=5800603 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_9871_4
CG_Woesearch_02, Woesearchaeota, Archaea

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4161..4676
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036FC88E
hypothetical protein Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_9871_5
AR18, Woesearchaeaota, DPANN, Archaea

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4742..5194
DNA (453bp) protein (151aa)
hypothetical protein
Putative uncharacterized protein id=5049632 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Putative uncharacterized protein Tax=AR18
rifcsplowo2_01_scaffold_9871_6

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5329..6249
DNA (921bp) protein (307aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=PYRB_PYRHO
Marine sediment metagenome DNA, contig: S01H1_L04531 {ECO:0000313|EMBL:GAF68006.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_01_scaffold_9871_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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6246..6542
DNA (297bp) protein (99aa)
aspartate carbamoyltransferase (EC:2.1.3.2); K00610 aspartate carbamoyltransferase regulatory subunit Tax=GWC2_Bacteroidetes_46_850_curated
Aspartate carbamoyltransferase regulatory chain id=1934166 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
aspartate carbamoyltransferase, regulatory subunit
rifcsplowo2_01_scaffold_9871_8
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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6539..6727
DNA (189bp) protein (63aa)
aspartate carbamoyltransferase; K00610 aspartate carbamoyltransferase regulatory subunit Tax=GWF2_Bacteroidetes_33_38_curated
aspartate carbamoyltransferase regulatory subunit
aspartate carbamoyltransferase regulatory subunit id=3651894 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
rifcsplowo2_01_scaffold_9871_9

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6728..7627
DNA (900bp) protein (300aa)
dihydroorotate dehydrogenase fumarate (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=planctomycete KSU-1 RepID=I3IRA1_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KKL85417.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifcsplowo2_01_scaffold_9871_10
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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7799..8614
DNA (816bp) protein (272aa)
Dihydroorotate oxidase (Dihydroorotate dehydrogenase B) electron-transfer subunit {ECO:0000313|EMBL:KHE92222.1}; EC=1.3.98.1 {ECO:0000313|EMBL:KHE92222.1};; TaxID=237368 species="Bacteria; Planctomyce
Dihydroorotate oxidase electron-transfer subunit n=1 Tax=planctomycete KSU-1 RepID=I3IRA0_9PLAN
oxidoreductase FAD/NAD(P)-binding domain protein
rifcsplowo2_01_scaffold_9871_11

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8611..9807
DNA (1197bp) protein (399aa)
Dihydroorotase, multifunctional complex type n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AMD4_SEBTE
Marine sediment metagenome DNA, contig: S01H1_L03890 {ECO:0000313|EMBL:GAF77568.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
dihydroorotase
rifcsplowo2_01_scaffold_9871_12
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

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9800..10426
DNA (627bp) protein (209aa)
pyrE; Orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Listeria fleischmannii subsp. coloradonensis RepID=H7F5V3_9LIST
Orotate phosphoribosyltransferase {ECO:0000313|EMBL:KKW16468.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
rifcsplowo2_01_scaffold_9871_13
AR11, Woesearchaeaota, DPANN, Archaea

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10390..11109
DNA (720bp) protein (240aa)
Orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] id=5046258 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase Tax=AR11
rifcsplowo2_01_scaffold_9871_14

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comp(11608..12762)
DNA (1155bp) protein (385aa)
Na+/H+-exchanging protein id=5048648 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Na+/H+-exchanging protein {ECO:0000313|EMBL:KHO45311.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
sodium/hydrogen exchanger
rifcsplowo2_01_scaffold_9871_15
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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12889..16659
DNA (3771bp) protein (1257aa)
Putative Gingipain R id=3444037 bin=GWC2_Ignavibacteria_56_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Gingipain R Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
hypothetical protein
rifcsplowo2_01_scaffold_9871_16
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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16698..17360
DNA (663bp) protein (221aa)
Uncharacterized protein {ECO:0000313|EMBL:KGG80446.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis
hypothetical protein
rifcsplowo2_01_scaffold_9871_17
CG_Elusi_02, Elusimicrobia, Bacteria

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17526..18281
DNA (756bp) protein (252aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=CG_Elusi_02
triosephosphate isomerase (EC:5.3.1.1)
triosephosphate isomerase n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B311E9
rifcsplowo2_01_scaffold_9871_18

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comp(18299..18565)
DNA (267bp) protein (89aa)
Putative uncharacterized protein id=5048508 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45542.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_9871_19
unknown

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comp(18567..18752)
DNA (186bp) protein (62aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9871_20
unknown

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comp(18796..19278)
DNA (483bp) protein (161aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9871_21
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(19292..19504)
DNA (213bp) protein (71aa)
id=5044625 Tax=CG_Woesearch_03
id=5044625 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_9871_22
unknown

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comp(19515..19994)
DNA (480bp) protein (160aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9871_23
AR4, Woesearchaeaota, DPANN, Archaea

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comp(20024..20563)
DNA (540bp) protein (180aa)
id=5044624 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsplowo2_01_scaffold_9871_24
AR11, Woesearchaeaota, DPANN, Archaea

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20852..21382
DNA (531bp) protein (177aa)
Ribosomal protein L16 Tax=AR11
50S ribosomal protein L10e id=5800536 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rpl10e; 50S ribosomal protein L10e
rifcsplowo2_01_scaffold_9871_25
unknown

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21418..21963
DNA (546bp) protein (182aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9871_26
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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22107..24170
DNA (2064bp) protein (688aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036A0D51
SMC domain protein; K03546 exonuclease SbcC Tax=RBG_13_Woesearchaeota_36_6_curated
SMC protein
rifcsplowo2_01_scaffold_9871_27
unknown

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24209..25783
DNA (1575bp) protein (525aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9871_28
unknown

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comp(25792..26313)
DNA (522bp) protein (174aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9871_29
AR11, Woesearchaeaota, DPANN, Archaea

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26593..28026
DNA (1434bp) protein (478aa)
hypothetical protein Tax=AR11
transmembrane_regions id=5043982 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_9871_30

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29461..29796
DNA (336bp) protein (112aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000373033A
DNA-directed RNA polymerase, subunit H
Displaying items 1-30 of 42 in total

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