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rifcsplowo2_01_scaffold_20507

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_20507_1
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


comp(3..536)
DNA (534bp) protein (178aa)
50S ribosomal protein L10 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKV5_METZD
ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=CG_Pacearch_06
50S ribosomal protein L10
rifcsplowo2_01_scaffold_20507_2
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists


comp(537..1154)
DNA (618bp) protein (206aa)
50S ribosomal protein L1 Tax=CG_Pacearch_02
50S ribosomal protein L1 id=5800447 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L1
rifcsplowo2_01_scaffold_20507_3
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(1330..1521)
DNA (192bp) protein (64aa)
Preprotein translocase subunit SecE n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZJW8_THELI id=5103028 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
protein translocase SEC61 complex, gamma subunit; K07342 protein transport protein SEC61 subunit gamma and related proteins Tax=RBG_16_Pacearchaeota_35_8_curated
Preprotein translocase subunit SecE
rifcsplowo2_01_scaffold_20507_4
unknown

Not on your lists

comp(1551..1892)
DNA (342bp) protein (114aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20507_5
unknown

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comp(1940..2566)
DNA (627bp) protein (209aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20507_6
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(2563..3654)
DNA (1092bp) protein (364aa)
Cell division protein FtsZ n=1 Tax=sediment metagenome RepID=D9PEV5_9ZZZZ
cell division protein FtsZ Tax=CG_Pacearch_03
Cell division protein FtsZ
rifcsplowo2_01_scaffold_20507_7
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(3709..4407)
DNA (699bp) protein (233aa)
FKBP-type peptidylprolyl isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] Tax=CG_Pacearch_06
FKBP-type peptidyl-prolyl cis-trans isomerase n=1 Tax=sediment metagenome RepID=D9PEV4_9ZZZZ
FKBP type peptidyl-prolyl cis-trans isomerase
rifcsplowo2_01_scaffold_20507_8
unknown

Not on your lists

4592..4822
DNA (231bp) protein (77aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20507_9
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists


4921..5313
DNA (393bp) protein (131aa)
Translation initiation factor 5A n=1 Tax=sediment metagenome RepID=D9PEV2_9ZZZZ
translation initiation factor IF-5A; K03263 translation initiation factor 5A Tax=CG_Pacearch_02
Translation initiation factor 5A
rifcsplowo2_01_scaffold_20507_10
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

5550..6977
DNA (1428bp) protein (476aa)
Peptidase M50 n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFS7_9EURY id=5103023 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
peptidase M50 Tax=CG_Pacearch_02
Peptidase M50
rifcsplowo2_01_scaffold_20507_11
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(6974..7330)
DNA (357bp) protein (119aa)
hypothetical protein
id=5103013 Tax=CG_Pacearch_06
id=5103013 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_20507_12
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

7381..7830
DNA (450bp) protein (150aa)
hypothetical protein
id=5800786 Tax=CG_Pacearch_03
id=5800786 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_20507_13

Not on your lists


7931..8446
DNA (516bp) protein (172aa)
Marine sediment metagenome DNA, contig: S06H3_L00396 {ECO:0000313|EMBL:GAI08525.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=5043662 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
LSU ribosomal protein L24A Rpl24A
rifcsplowo2_01_scaffold_20507_14
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


8443..9078
DNA (636bp) protein (212aa)
50S ribosomal protein L11 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369B37C
rpl11p; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=CG_Pacearch_06
LSU ribosomal protein L11P
Displaying 14 items

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