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rifcsplowo2_01_scaffold_19382

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_19382_1
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(345..1931)
DNA (1587bp) protein (529aa)
L-lactate permease n=1 Tax=Bacillus pseudofirmus (strain OF4) RepID=D3FWT2_BACPE
lldP_[C]; L-lactate permease Tax=CG_Pacearch_05
lctP; L-lactate permease
rifcsplowo2_01_scaffold_19382_2
unknown

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comp(2057..2389)
DNA (333bp) protein (111aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19382_3
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(2426..3037)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003738263
SSU ribosomal protein S3AE
Ribosomal protein S3AE Tax=CG_Pacearch_03
rifcsplowo2_01_scaffold_19382_4
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(3039..3368)
DNA (330bp) protein (110aa)
50S ribosomal protein L44e n=2 Tax=Thermococcus RepID=G0HP09_THES4
Marine sediment metagenome DNA, contig: S01H1_L00093 Tax=CG_Pacearch_02
ribosomal protein L44E
rifcsplowo2_01_scaffold_19382_5
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists


3592..3984
DNA (393bp) protein (131aa)
30S ribosomal protein S15 n=1 Tax=Acidilobus saccharovorans (strain DSM 16705 / VKM B-2471 / 345-15) RepID=D9Q2G9_ACIS3
rps15p; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=CG_Pacearch_03
30S ribosomal protein S15
rifcsplowo2_01_scaffold_19382_6
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

4005..5342
DNA (1338bp) protein (446aa)
Phosphoesterase, RecJ-like protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RBX6_9EURY id=5103092 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
recJ-like; ss-DNA-specific exonuclease recj related; K07463 archaea-specific RecJ-like exonuclease Tax=CG_Pacearch_03
Phosphoesterase, RecJ-like protein
rifcsplowo2_01_scaffold_19382_7
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

5474..6244
DNA (771bp) protein (257aa)
translation initiation factor 2 subunit alpha; K03237 translation initiation factor 2 subunit 1 Tax=AR19
translation initiation factor 2, alpha subunit; K03237 translation initiation factor 2 subunit 1 id=5047465 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_19382_8
unknown

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comp(6393..6635)
DNA (243bp) protein (81aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19382_9
CG_Pacearch_01, Pacearchaeota, Archaea

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comp(6693..7325)
DNA (633bp) protein (211aa)
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=CG_Pacearch_01
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] id=5040536 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
uracil-DNA glycosylase
rifcsplowo2_01_scaffold_19382_10
unknown

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7377..7880
DNA (504bp) protein (168aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19382_11
unknown

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7871..8335
DNA (465bp) protein (155aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19382_12
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

8614..9186
DNA (573bp) protein (191aa)
nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=CG_Pacearch_02
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E4B7_9BACT
rifcsplowo2_01_scaffold_19382_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

9564..10865
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037D30C4
integrase Tax=RBG_13_Pacearchaeota_36_9_curated
integrase
Displaying 13 items

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