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rifcsplowo2_01_scaffold_12923

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_12923_1
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

3..167
DNA (165bp) protein (55aa)
ychF; translation-associated GTPase; K06942 Tax=CG_Pacearch_05
GTPase domain-containing protein; K06942 id=5042272 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_12923_2
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

566..790
DNA (225bp) protein (75aa)
hypothetical protein; K09131 hypothetical protein id=36024 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein; K09131 hypothetical protein
Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_12923_3
unknown

Not on your lists

822..1037
DNA (216bp) protein (72aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12923_4
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

1062..1442
DNA (381bp) protein (127aa)
hypothetical protein Tax=CG_Pacearch_06
Metallopeptidase-like protein id=3673925 bin=PER_GWC2_41_7 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
metallopeptidase
rifcsplowo2_01_scaffold_12923_5
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

1444..1788
DNA (345bp) protein (115aa)
hypothetical protein; K09005 hypothetical protein Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_12923_6
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(1835..2695)
DNA (861bp) protein (287aa)
ISA0963-4, putative transposase n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28888_ARCFU
ISA0963-5 transposase; K07497 putative transposase Tax=CG_Pacearch_06
ISA0963-4 transposase
rifcsplowo2_01_scaffold_12923_7
unknown

Not on your lists

3003..3629
DNA (627bp) protein (209aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12923_8
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3743..4777
DNA (1035bp) protein (345aa)
Calcium/proton antiporter, CaCA family n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SSW5_CLOC7
CaCA family calcium/proton antiporter
Calcium/proton antiporter, CaCA family {ECO:0000313|EMBL:ADL52627.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulov
rifcsplowo2_01_scaffold_12923_9
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

4861..5052
DNA (192bp) protein (64aa)
cold shock DNA binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=CG_Pacearch_05
Cold shock DNA binding domain protein id=5799625 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
cold shock DNA binding domain-containing protein
rifcsplowo2_01_scaffold_12923_10
unknown

Not on your lists

5080..5235
DNA (156bp) protein (52aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12923_11
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(5237..6589)
DNA (1353bp) protein (451aa)
Dead box RNA helicase n=2 Tax=Methanococcoides burtonii RepID=Q12UP5_METBU
ATP-dependent RNA helicase Tax=CG_Pacearch_06
DEAD/DEAH box helicase-like protein
rifcsplowo2_01_scaffold_12923_12
unknown

Not on your lists

comp(6590..6757)
DNA (168bp) protein (56aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12923_13
RIFOXYC1_FULL_OD1_Moranbacteria_44_13_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

6982..7491
DNA (510bp) protein (170aa)
hypothetical protein Tax=RIFOXYC1_FULL_OD1_Moranbacteria_44_13_curated
hypothetical protein id=86887 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
hypothetical protein
rifcsplowo2_01_scaffold_12923_14
unknown

Not on your lists

comp(7782..7892)
DNA (111bp) protein (37aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12923_15
GWF2_OD1_39_13, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

7986..8306
DNA (321bp) protein (107aa)
seg 69..82 id=13034 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
Tax=GWF2_OD1_39_13
rifcsplowo2_01_scaffold_12923_16
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8647..8976)
DNA (330bp) protein (110aa)
UPI0003D1C425 related cluster n=1 Tax=unknown RepID=UPI0003D1C425
Uncharacterized protein {ECO:0000313|EMBL:ETA67845.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tinda
rifcsplowo2_01_scaffold_12923_17
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(8958..9608)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z2Z5_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
putative membrane protein
rifcsplowo2_01_scaffold_12923_18
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(9605..9841)
DNA (237bp) protein (79aa)
id=14630067 Tax=CG_Pacearch_01
alias=ws6_closed_nogaps_final_478 id=15188189 bin=GWF2_WS6 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=GWF2_WS6 organism_group=WS6 (Doikabacteria) organism_desc=Complete genome
rifcsplowo2_01_scaffold_12923_19

Not on your lists

10598..10915
DNA (318bp) protein (106aa)
Marine sediment metagenome DNA, contig: S01H1_L01890 {ECO:0000313|EMBL:GAF85468.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsplowo2_01_scaffold_12923_20
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

10940..11251
DNA (312bp) protein (104aa)
hypothetical protein Tax=AR13
rifcsplowo2_01_scaffold_12923_21
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(11248..11634)
DNA (387bp) protein (129aa)
Tax=CG_Pacearch_03
rifcsplowo2_01_scaffold_12923_22
unknown

Not on your lists

11891..12421
DNA (531bp) protein (177aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12923_23
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

12474..13028
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E1242
LemA family protein Tax=CG_Pacearch_02
LemA protein
rifcsplowo2_01_scaffold_12923_24
R_Gammaproteobacteria_41_20, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13028..13369
DNA (342bp) protein (114aa)
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_41_20_curated
rifcsplowo2_01_scaffold_12923_25
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

13431..15524
DNA (2094bp) protein (698aa)
Marine sediment metagenome DNA, contig: S12H4_L01639 Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_12923_26
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15638..16546
DNA (909bp) protein (303aa)
hypothetical protein id=1871878 bin=GWB2_Proteobacteria_55_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
id=4419269 Tax=GWB2_Deltaproteobacteria_55_19_curated
glycosyl transferase
rifcsplowo2_01_scaffold_12923_27
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(16549..17430)
DNA (882bp) protein (294aa)
sulfurtransferase n=1 Tax=Alicyclobacillus pohliae RepID=UPI0003630E9E
Putative sulfurtransferase; K07146 UPF0176 protein Tax=CG_Pacearch_06
sulfurtransferase
rifcsplowo2_01_scaffold_12923_28
unknown

Not on your lists

comp(17506..17793)
DNA (288bp) protein (96aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12923_29
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(17887..19290)
DNA (1404bp) protein (468aa)
amidophosphoribosyltransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14] Tax=RBG_16_Zixibacteria_43_9_curated
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E8H9_FLESM
rifcsplowo2_01_scaffold_12923_30
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

19418..20323
DNA (906bp) protein (302aa)
HtpX-2 peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=CG_Pacearch_06
Heat shock protein HtpX (EC:3.4.24.-)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376731D
Displaying items 1-30 of 34 in total

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