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rifcsplowo2_01_scaffold_31854

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_31854_1
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

171..422
-----------------
DNA (252bp)
protein (84aa)
Tax=CG_Pacearch_02
rifcsplowo2_01_scaffold_31854_2
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(419..1450)
-----------------
DNA (1032bp)
protein (344aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAG4_HALJB id=5102898 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=CG_Pacearch_03
hypothetical protein
rifcsplowo2_01_scaffold_31854_3

Not on your lists

1544..2251
-----------------
DNA (708bp)
protein (236aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55541.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
rifcsplowo2_01_scaffold_31854_4
unknown

Not on your lists

comp(2248..2385)
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

rifcsplowo2_01_scaffold_31854_5
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(2666..3277)
-----------------
DNA (612bp)
protein (204aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_31854_6

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comp(3284..3652)
-----------------
DNA (369bp)
protein (123aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003705994
PIN protein {ECO:0000313|EMBL:KHO50853.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
PIN protein
rifcsplowo2_01_scaffold_31854_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3643..3885)
-----------------
DNA (243bp)
protein (81aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMF4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57859.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
rifcsplowo2_01_scaffold_31854_8
unknown

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comp(4604..5221)
-----------------
DNA (618bp)
protein (206aa)

This feature has no annotations

rifcsplowo2_01_scaffold_31854_9
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(5225..5527)
-----------------
DNA (303bp)
protein (101aa)
Tax=RBG_16_Micrarchaeota_49_10_curated
rifcsplowo2_01_scaffold_31854_10
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

5754..6443
-----------------
DNA (690bp)
protein (230aa)
Putative uncharacterized protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z2D0_9EURY
hypothetical protein Tax=RBG_16_Micrarchaeota_49_10_curated
hypothetical protein
rifcsplowo2_01_scaffold_31854_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

6695..7609
-----------------
DNA (915bp)
protein (305aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00035FEA0D
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
rifcsplowo2_01_scaffold_31854_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

7602..8012
-----------------
DNA (411bp)
protein (137aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
rifcsplowo2_01_scaffold_31854_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(8085..8489)
-----------------
DNA (405bp)
protein (135aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B40BCB
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_31854_14
unknown

Not on your lists

comp(8491..8847)
-----------------
DNA (357bp)
protein (119aa)

This feature has no annotations

rifcsplowo2_01_scaffold_31854_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

8867..9838
-----------------
DNA (972bp)
protein (324aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035F75AC
lrpC; Lpr family transcriptional regulator Tax=RBG_13_Pacearchaeota_36_9_curated
Transcriptional regulator
rifcsplowo2_01_scaffold_31854_16
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

9876..10103
-----------------
DNA (228bp)
protein (76aa)
hypothetical protein
id=5050163 Tax=RBG_13_Pacearchaeota_36_9_curated
id=5050163 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_31854_17

Not on your lists

10096..10398
-----------------
DNA (303bp)
protein (101aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGP2_9EURY id=5103474 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO50258.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
rifcsplowo2_01_scaffold_31854_18
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(10610..10885)
-----------------
DNA (276bp)
protein (92aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000378BE12
ef1B; elongation factor 1-beta; K03232 elongation factor 1-beta Tax=CG_Pacearch_02
rifcsplowo2_01_scaffold_31854_19
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

10961..11335
-----------------
DNA (375bp)
protein (125aa)
nucleic acid binding ob-fold tRNA/helicase-type; K07466 replication factor A1 Tax=CG_Pacearch_03
OB-fold tRNA/helicase-type nucleic acid binding protein; K07466 replication factor A1 id=5046768 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Nucleic acid binding OB-fold tRNA/helicase-type
rifcsplowo2_01_scaffold_31854_20
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(12383..12805)
-----------------
DNA (423bp)
protein (141aa)
hypothetical protein Tax=CG_Pacearch_03
Uncharacterized protein id=5799641 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_31854_21
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

12916..13608
-----------------
DNA (693bp)
protein (231aa)
vmp22; metalloproteinase, extracellular matrix glycoprotein VMP22 Tax=CG_Pacearch_02
rifcsplowo2_01_scaffold_31854_22
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

13887..14324
-----------------
DNA (438bp)
protein (146aa)
Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_31854_23

Not on your lists

14350..16185
-----------------
DNA (1836bp)
protein (612aa)
Parallel beta-helix repeat protein n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BAF8_METIK
Periplasmic copper-binding protein {ECO:0000313|EMBL:AIF01511.1}; TaxID=1457885 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_149_F
parallel beta-helix repeat-containing protein
rifcsplowo2_01_scaffold_31854_24
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists


16374..18536
-----------------
DNA (2163bp)
protein (721aa)
alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=CG_Pacearch_04
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EN67_9BACT
Alanine-tRNA ligase
Displaying 24 items

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