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rifcsplowo2_01_scaffold_11114

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_11114_1

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comp(35..547)
DNA (513bp) protein (171aa)
Phosphodiesterase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8H0_HALJB
Uncharacterized protein {ECO:0000313|EMBL:KHO49571.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
phosphodiesterase
rifcsplowo2_01_scaffold_11114_2
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1125..1337)
DNA (213bp) protein (71aa)
Transcription factor CBF/NF-Y/histone domain-containing protein id=2175381 bin=GWA2_Bacteroidetes_42_15 species=nanoarchaeote Nst1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Nanoarchaeota tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
archaeal histone Tax=CG_Woesearch_02
archaeal histone
rifcsplowo2_01_scaffold_11114_3
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

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1451..3139
DNA (1689bp) protein (563aa)
Glutamate-tRNA ligase {ECO:0000313|EMBL:KKS24572.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
Glutamate--tRNA ligase id=5800680 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Glutamate-tRNA ligase
rifcsplowo2_01_scaffold_11114_4
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

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3196..3378
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS24571.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
rifcsplowo2_01_scaffold_11114_5
CG_Pacearch_03, Pacearchaeota, Archaea

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3427..3645
DNA (219bp) protein (73aa)
Tax=CG_Pacearch_03
rifcsplowo2_01_scaffold_11114_6
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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3649..4008
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003705994
PIN protein
PIN domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
rifcsplowo2_01_scaffold_11114_7
AR11, Woesearchaeaota, DPANN, Archaea

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comp(4009..4497)
DNA (489bp) protein (163aa)
Tax=AR11
rifcsplowo2_01_scaffold_11114_8
unknown

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comp(4631..5263)
DNA (633bp) protein (211aa)
id=5800676 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_11114_9
unknown

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comp(5410..5865)
DNA (456bp) protein (152aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11114_10
unknown

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6138..6683
DNA (546bp) protein (182aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11114_11
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

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comp(6714..7499)
DNA (786bp) protein (262aa)
hypothetical protein Tax=RBG_16_Planctomycetes_64_10_curated
rifcsplowo2_01_scaffold_11114_12
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(7676..8539)
DNA (864bp) protein (288aa)
Putative HTH-type transcriptional regulatory protein Metin_1036 n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSZ1_METIM
XRE family transcriptional regulator; K07728 putative transcriptional regulator Tax=CG_Woesearch_02
transcriptional regulator, XRE family
rifcsplowo2_01_scaffold_11114_13

Not on your lists

8629..9177
DNA (549bp) protein (183aa)
(d)CMP kinase {ECO:0000256|SAAS:SAAS00054803}; EC=2.7.4.25 {ECO:0000256|SAAS:SAAS00054803};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] id=5046594 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
cytidylate kinase (EC:2.7.4.14)
rifcsplowo2_01_scaffold_11114_14
unknown

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9208..9603
DNA (396bp) protein (132aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11114_15

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9654..10427
DNA (774bp) protein (258aa)
peptidyl-prolyl cis-trans isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] id=5043665 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Marine sediment metagenome DNA, contig: S01H1_S20459 {ECO:0000313|EMBL:GAG16317.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Peptidyl-prolyl cis-trans isomerase
rifcsplowo2_01_scaffold_11114_16

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10488..11702
DNA (1215bp) protein (405aa)
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
cell division protein FtsZ; K03531 cell division protein FtsZ id=5043664 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Cell division protein FtsZ
rifcsplowo2_01_scaffold_11114_17
unknown

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11687..12001
DNA (315bp) protein (105aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11114_18

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12134..12328
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:AIF00793.1}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins id=5043663 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins
rifcsplowo2_01_scaffold_11114_19

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12421..12924
DNA (504bp) protein (168aa)
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=5043662 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
LSU ribosomal protein L24A Rpl24A
rifcsplowo2_01_scaffold_11114_20
unknown

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13058..13732
DNA (675bp) protein (225aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11114_21
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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13878..14972
DNA (1095bp) protein (365aa)
Putative uncharacterized protein Tax=RBG_16_Micrarchaeota_36_9_curated
rifcsplowo2_01_scaffold_11114_22

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14999..15790
DNA (792bp) protein (264aa)
Large subunit ribosomal protein L11 {ECO:0000313|EMBL:KHO50741.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5043660 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
LSU ribosomal protein L11P
rifcsplowo2_01_scaffold_11114_23

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comp(15828..16676)
DNA (849bp) protein (283aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=1457870 species="Archa
D-tyrosyl-tRNA(Tyr) deacylase id=4541657 bin=PER_GWC2_41_7 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Hypothetical protein
rifcsplowo2_01_scaffold_11114_24
unknown

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comp(16712..17017)
DNA (306bp) protein (102aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11114_25
AR11, Woesearchaeaota, DPANN, Archaea

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17204..17377
DNA (174bp) protein (58aa)
id=4541659 bin=PER_GWC2_41_7 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=AR11
rifcsplowo2_01_scaffold_11114_26
AR11, Woesearchaeaota, DPANN, Archaea

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17580..17915
DNA (336bp) protein (112aa)
id=5043594 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR11
rifcsplowo2_01_scaffold_11114_27
AR11, Woesearchaeaota, DPANN, Archaea

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17919..20537
DNA (2619bp) protein (873aa)
cation-transporting ATPase; K01537 Ca2+-transporting ATPase [EC:3.6.3.8] Tax=AR11
Cation-transporting ATPase A, P type (ATPase, E1-E2 type) id=5800624 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
cation-transporting ATPase
rifcsplowo2_01_scaffold_11114_28
R_OP11_Roizmanbacteria_41_22, Roizmannbacteria, Microgenomates, Bacteria

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20636..21226
DNA (591bp) protein (197aa)
seg 15..27 Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_41_22_curated
Uncharacterized protein (Fragment) id=5800258 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_11114_29
CG_Pacearch_02, Pacearchaeota, Archaea

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21229..21822
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A3H3_NITMS
hypothetical protein Tax=CG_Pacearch_02
hypothetical protein
rifcsplowo2_01_scaffold_11114_30
AR11, Woesearchaeaota, DPANN, Archaea

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22007..24100
DNA (2094bp) protein (698aa)
sodium:proton antiporter n=1 Tax=Pedobacter agri RepID=UPI00029AA81D
transporter, CPA2 family; K03455 monovalent cation:H+ antiporter-2, CPA2 family Tax=AR11
membrane protein of unknown function
Displaying items 1-30 of 31 in total

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