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rifcsphigho2_02_scaffold_8679

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_8679_1
unknown

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comp(3..134)
DNA (132bp) protein (44aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8679_2

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211..1668
DNA (1458bp) protein (486aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] id=5048716 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_8679_3
unknown

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1717..2145
DNA (429bp) protein (143aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8679_4
AR11, Woesearchaeaota, DPANN, Archaea

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2151..2582
DNA (432bp) protein (144aa)
Putative uncharacterized protein Tax=AR11
hypothetical protein id=5051029 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Protein archease
rifcsphigho2_02_scaffold_8679_5
unknown

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2626..3162
DNA (537bp) protein (179aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8679_6
CG_Elusi_02, Elusimicrobia, Bacteria

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3245..4558
DNA (1314bp) protein (438aa)
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=CG_Elusi_02
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoamide dehydrogenase n=1 Tax=Thermotoga thermarum DSM 5069 RepID=F7YW30_9THEM
rifcsphigho2_02_scaffold_8679_7

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comp(4561..5790)
DNA (1230bp) protein (410aa)
Acetolactate synthase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PRK0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KKT25718.1}; TaxID=1618828 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_9b.;"
alsS; acetolactate synthase
rifcsphigho2_02_scaffold_8679_8
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

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comp(5855..6112)
DNA (258bp) protein (86aa)
Acetolactate synthase n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D164_9ARCH
ilvB; acetolactate synthase Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
Acetolactate synthase
rifcsphigho2_02_scaffold_8679_9
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

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comp(6340..7716)
DNA (1377bp) protein (459aa)
Aldehyde Dehydrogenase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XT61_9BACT
aldehyde dehydrogenase
Tax=BJP_IG2158_Zixibacteria_48_33
rifcsphigho2_02_scaffold_8679_10
AR15, Woesearchaeaota, DPANN, Archaea

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7892..8794
DNA (903bp) protein (301aa)
Probable lipoyl synthase id=5799637 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Probable lipoyl synthase Tax=AR15
hypothetical protein
rifcsphigho2_02_scaffold_8679_11

Not on your lists

8802..9869
DNA (1068bp) protein (356aa)
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.4 1.2.4.1)
Pyruvate dehydrogenase E1 component subunit alpha id=5799638 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000313|EMBL:AJF60969.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_02_scaffold_8679_12

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9869..10837
DNA (969bp) protein (323aa)
Transketolase central region id=5799639 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Transketolase central region {ECO:0000313|EMBL:AJF60970.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
2-oxoisovalerate dehydrogenase
rifcsphigho2_02_scaffold_8679_13
AR15, Woesearchaeaota, DPANN, Archaea

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11044..12375
DNA (1332bp) protein (444aa)
pyruvate dehydrogenase E2 component dihydrolipoamide acetyltransferase (EC:2.3.1.12)
Branched-chain 2-oxoacid dehydrogenase complex, E2 protein, dihydrolipoamide acyltransferase, putative id=5799640 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Branched-chain 2-oxoacid dehydrogenase complex, E2 protein, dihydrolipoamide acyltransferase, putative Tax=AR15
rifcsphigho2_02_scaffold_8679_14
unknown

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12394..13011
DNA (618bp) protein (206aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8679_15
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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12950..14200
DNA (1251bp) protein (417aa)
aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase {ECO:0000313|EMBL:ACI21177.1}; EC=2.6.1.1 {ECO:0000313|EMBL:ACI21177.1};; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;"
Aspartate aminotransferase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YIN0_THEYD
rifcsphigho2_02_scaffold_8679_16
AR5, Aenigmarchaeota, DPANN, Archaea

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14202..15677
DNA (1476bp) protein (492aa)
phosphoenolpyruvate carboxylase (EC:4.1.1.31); K01595 phosphoenolpyruvate carboxylase [EC:4.1.1.31] id=18248580 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
phosphoenolpyruvate carboxylase (EC:4.1.1.31); K01595 phosphoenolpyruvate carboxylase [EC:4.1.1.31] Tax=AR5
phosphoenolpyruvate carboxylase
rifcsphigho2_02_scaffold_8679_17
unknown

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15725..16027
DNA (303bp) protein (101aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8679_18
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(16046..16807)
DNA (762bp) protein (254aa)
putative biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=RBG_16_Euryarchaeota_41_19_curated
putative biotin/lipoate A/B protein ligase
Lipoate-protein ligase A, C-terminal id=5799643 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_8679_19
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists

comp(16849..17091)
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ17610.1}; TaxID=1618331 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
id=5046581 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_8679_20
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

comp(17113..17583)
DNA (471bp) protein (157aa)
Bacterioferritin id=1250209 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
bacterioferritin; K03594 bacterioferritin Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
bacterioferritin
rifcsphigho2_02_scaffold_8679_21
unknown

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comp(17594..17749)
DNA (156bp) protein (52aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8679_22
unknown

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comp(17904..18497)
DNA (594bp) protein (198aa)
Iron-sulfur cluster assembly accessory protein n=2 Tax=Waddlia chondrophila RepID=D6YW49_WADCW id=5103548 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Iron-sulfur cluster assembly accessory protein n=2 Tax=Waddlia chondrophila RepID=D6YW49_WADCW Tax=AR20
Iron-sulfur cluster assembly accessory protein
rifcsphigho2_02_scaffold_8679_23
unknown

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comp(18561..19157)
DNA (597bp) protein (199aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8679_24
CG_Pacearch_06, Pacearchaeota, Archaea

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comp(19223..19462)
DNA (240bp) protein (80aa)
sodA; superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=CG_Pacearch_06
superoxide dismutase n=1 Tax=Bacillus fordii RepID=UPI0003789532
sodA; superoxide dismutase SodA
Displaying 24 items

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