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rifcsphigho2_02_scaffold_14730

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_14730_1

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comp(207..1748)
DNA (1542bp) protein (514aa)
Glucose-6-phosphate 1-dehydrogenase id=2823121 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
Glucose-6-phosphate 1-dehydrogenase {ECO:0000313|EMBL:KKW24904.1}; TaxID=1620413 species="Bacteria.;" source="bacterium GW2011_GWC1_52_13.;"
glucose-6-phosphate 1-dehydrogenase
rifcsphigho2_02_scaffold_14730_2

Not on your lists

comp(1750..2676)
DNA (927bp) protein (309aa)
6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase, decarboxylating id=2596772 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000313|EMBL:KKW24903.1}; TaxID=1620413 species="Bacteria.;" source="bacterium GW2011_GWC1_52_13.;"
rifcsphigho2_02_scaffold_14730_3
AR9, Woesearchaeaota, DPANN, Archaea

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comp(3102..4127)
DNA (1026bp) protein (342aa)
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Transcription regulator TrmB, N-terminal id=5041732 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
rifcsphigho2_02_scaffold_14730_4
unknown

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4234..5049
DNA (816bp) protein (272aa)

This feature has no annotations

rifcsphigho2_02_scaffold_14730_5
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5096..5689
DNA (594bp) protein (198aa)
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Methanosarcina mazei RepID=M1Q0N0_METMZ
Peptidylprolyl isomerase {ECO:0000313|EMBL:KKH45878.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina
Peptidyl-prolyl cis-trans isomerase
rifcsphigho2_02_scaffold_14730_6
unknown

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comp(6193..6360)
DNA (168bp) protein (56aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037944A6
Uncharacterized protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I717_METCZ Tax=AR20
hypothetical protein
rifcsphigho2_02_scaffold_14730_7
unknown

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6457..6999
DNA (543bp) protein (181aa)

This feature has no annotations

rifcsphigho2_02_scaffold_14730_8
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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7118..8185
DNA (1068bp) protein (356aa)
dinP; DNA polymerase IV (archaeal DinB-like DNA polymerase) (EC:2.7.7.7) Tax=RBG_13_Bathyarchaeota_46_16b_curated
DNA-directed DNA polymerase (EC:2.7.7.7)
UPI0003D19FFC related cluster n=1 Tax=unknown RepID=UPI0003D19FFC
rifcsphigho2_02_scaffold_14730_9
GWA1_Berkelbacteria_39_10_partial, Berkelbacteria, Bacteria

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8542..8811
DNA (270bp) protein (90aa)
Translation elongation factor-like protein n=7 Tax=Dehalococcoides mccartyi RepID=D2BID7_DEHSV id=5103094 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Translation elongation factor-like protein Tax=GWA1_Berkelbacteria_39_10_partial
Translation elongation factor-like protein
rifcsphigho2_02_scaffold_14730_10
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8925..9128
DNA (204bp) protein (68aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
rifcsphigho2_02_scaffold_14730_11
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9128..9517
DNA (390bp) protein (130aa)
hypothetical protein
PIN domain-like id=5241235 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
rifcsphigho2_02_scaffold_14730_12
AR11, Woesearchaeaota, DPANN, Archaea

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9566..12085
DNA (2520bp) protein (840aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] id=5048640 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase Tax=AR11
rifcsphigho2_02_scaffold_14730_13
unknown

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comp(12088..12429)
DNA (342bp) protein (114aa)

This feature has no annotations

rifcsphigho2_02_scaffold_14730_14
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(12897..14102)
DNA (1206bp) protein (402aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5048642 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_14730_15
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(14147..15334)
DNA (1188bp) protein (396aa)
Membrane-bound lytic murein transglycosylase D; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] Tax=RBG_16_Ignavibacteria_35_7_curated
Membrane-bound lytic murein transglycosylase D id=3965152 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Lytic transglycosylase catalytic
rifcsphigho2_02_scaffold_14730_16

Not on your lists

15481..16512
DNA (1032bp) protein (344aa)
hypothetical protein
Phosphoesterase, DHHA1 id=5044037 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO46880.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsphigho2_02_scaffold_14730_17
unknown

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comp(16501..17016)
DNA (516bp) protein (172aa)

This feature has no annotations

rifcsphigho2_02_scaffold_14730_18

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comp(17371..18009)
DNA (639bp) protein (213aa)
Marine sediment metagenome DNA, contig: S01H1_S05570 {ECO:0000313|EMBL:GAG06191.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsphigho2_02_scaffold_14730_19
unknown

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comp(18083..18436)
DNA (354bp) protein (118aa)

This feature has no annotations

rifcsphigho2_02_scaffold_14730_20
unknown

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comp(18443..18562)
DNA (120bp) protein (40aa)

This feature has no annotations

rifcsphigho2_02_scaffold_14730_21
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(18762..19115)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DPJ9_9FIRM
hypothetical protein Tax=CG_Aenigma_01
hypothetical protein
rifcsphigho2_02_scaffold_14730_22
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(19112..19243)
DNA (132bp) protein (44aa)
DNA polymerase beta domain-containing protein; K07075 Tax=CG_Aenigma_01
Displaying 22 items

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