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rifcsphigho2_02_scaffold_23117

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_23117_1
GWA1_OP11_48_10_plus, Microgenomates, Bacteria

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comp(84..401)
DNA (318bp) protein (106aa)
Methylase N-4/N-6 domain protein {ECO:0000313|EMBL:KKU92189.1}; TaxID=1618496 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA1_48_10.;"
DNA methylase N-4/N-6 domain protein id=2803727 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
putative DNA modification methylase
rifcsphigho2_02_scaffold_23117_2

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507..2063
DNA (1557bp) protein (519aa)
Aspartate ammonia-lyase {ECO:0000313|EMBL:CEG12175.1}; EC=4.3.1.1 {ECO:0000313|EMBL:CEG12175.1};; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwat
aspA; aspartate ammonia-lyase; K01744 aspartate ammonia-lyase [EC:4.3.1.1] id=5093997 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
aspartate ammonia-lyase (EC:4.3.1.1)
rifcsphigho2_02_scaffold_23117_3

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comp(2052..3185)
DNA (1134bp) protein (378aa)
carboxynorspermidine decarboxylase (EC:4.1.1.-)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YQY9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD27754.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rifcsphigho2_02_scaffold_23117_4
Deferribacter desulfuricans, Deferribacter, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

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comp(3146..4363)
DNA (1218bp) protein (406aa)
saccharopine dehydrogenase (EC:1.5.1.7)
Saccharopine dehydrogenase {ECO:0000313|EMBL:BAI80754.1}; EC=1.5.1.7 {ECO:0000313|EMBL:BAI80754.1};; TaxID=639282 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Deferribact
Saccharopine dehydrogenase n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PDT1_DEFDS rbh
rifcsphigho2_02_scaffold_23117_5
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

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comp(4374..5231)
DNA (858bp) protein (286aa)
agmatinase SpeB Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
Agmatinase id=3695173 bin=GWF2_Planctomycete_41_51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
arginase
rifcsphigho2_02_scaffold_23117_6
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(5233..5790)
DNA (558bp) protein (186aa)
hypothetical protein; K02626 arginine decarboxylase [EC:4.1.1.19] Tax=RBG_16_Spirochaete_67_19_curated
Uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZV41_9BACT
putative arginine decarboxylase, pyruvoyl-dependent
rifcsphigho2_02_scaffold_23117_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6231..7397
DNA (1167bp) protein (389aa)
Malate dehydrogenase (Oxaloacetate-decarboxylating) n=2 Tax=Clostridium botulinum F RepID=A7GA05_CLOBL
malic enzyme
Malate dehydrogenase (Oxaloacetate-decarboxylating) {ECO:0000313|EMBL:ABS41733.1}; TaxID=441772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
rifcsphigho2_02_scaffold_23117_8
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7436..7798)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289DBAC
Uncharacterized protein {ECO:0000313|EMBL:AJP73030.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
rifcsphigho2_02_scaffold_23117_9
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(7795..8322)
DNA (528bp) protein (176aa)
Glycosylase; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] Tax=GWC2_Ignavibacteria_rel_36_12_curated
3-methyladenine DNA glycosylase n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4AVX4_MARSH
3-methyladenine DNA glycosylase
rifcsphigho2_02_scaffold_23117_10
unknown

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comp(8364..8717)
DNA (354bp) protein (118aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23117_11

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comp(8747..9355)
DNA (609bp) protein (203aa)
seg id=5799725 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61056.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_02_scaffold_23117_12
AR17, Woesearchaeaota, DPANN, Archaea

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9437..9877
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Cenarchaeum symbiosum RepID=O74050_CENSY id=5103566 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=AR17
hypothetical protein
rifcsphigho2_02_scaffold_23117_13
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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9893..10948
DNA (1056bp) protein (352aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A1N1_MAHA5
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase {ECO:0000313|EMBL:KKR78762.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.
Displaying 13 items

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