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BJP_Ig2157_Hor_140_2014_Thermoplasmata_53_6

07V140M03_2014_Euryarchaeota_52_6
In projects: 07V140M03_2014  |  diaphorachaeota  |  archaea_ggkbase  |  horonobe_genomes

Consensus taxonomy: Euryarchaeota  →  Archaea

Metagenomic Context

Parent: BJP_IG2157_UNK

Properties

Avg. coverage: 6.27 Longest contig: 13.27 Kbp Bin length: 776.56 Kbp GC content: 52.38 %
Contigs count: 246 Features count: 885 rRNAs count: 0 tRNAs count: 11

Genome completeness

partial RP 25 / 55 BSCG 9 / 51 ASCG 28 / 38 MC: 3

Description

Fragmented. May not be clean -->curated, please check (YA) Thermoplasmata archaeon HGW-Thermoplasmata-2 (possibly novel; 61.1% of identity based on NCBI blast search) old name; BJP_IG2157_Euryarchaeota_53_6

Displaying items 51-100 of 246 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2157_scaffold_20508
Species: Thermoplasmatales archaeon SCGC AB-540-F20 (50%)
2 1349 bp 51.74 5.00 90.73
bjp_ig2157_scaffold_20451
Species: BJP_IG2157_Anaerolineales_55_23 (100%)
1 1352 bp 51.63 4.33 99.85
bjp_ig2157_scaffold_20336
Species: BJP_S1_SUB10_Methanoculleus_61_9 (50%)
2 1357 bp 45.98 6.30 99.26
bjp_ig2157_scaffold_20346
Phylum: Euryarchaeota (66.67%)
3 1357 bp 51.81 4.64 86.44
bjp_ig2157_scaffold_19872
Species: Thermoplasmatales archaeon SCGC AB-539-N05 (50%)
2 1382 bp 53.40 6.84 94.21
bjp_ig2157_scaffold_19799
Species: Thermoplasmatales archaeon SCGC AB-539-N05 (100%)
1 1386 bp 47.62 4.98 99.78
bjp_ig2157_scaffold_19497
Species: Methanolacinia petrolearia (50%)
2 1403 bp 48.68 4.70 91.52
bjp_ig2157_scaffold_18756
Species: Thermoplasmatales archaeon SCGC AB-539-C06 (100%)
1 1446 bp 54.43 3.94 92.53
bjp_ig2157_scaffold_18722
Species: Thermoplasmatales archaeon SCGC AB-539-N05 (100%)
1 1448 bp 51.73 5.08 99.86
bjp_ig2157_scaffold_18602
Species: BJP_IG2158_Thermoplasmatales_53_16 (100%)
2 1455 bp 52.37 8.04 74.02
bjp_ig2157_scaffold_18552
Species: archaeon GW2011_AR19 (50%)
2 1459 bp 54.15 5.65 89.86
bjp_ig2157_scaffold_18494
Species: BJP_IG2069_Methanobacteriales_33_27 (100%)
2 1462 bp 46.51 4.41 69.36
bjp_ig2157_scaffold_18216
Species: Thermococcus gammatolerans (50%)
2 1479 bp 55.98 3.55 76.06
bjp_ig2157_scaffold_18156
Species: RBG_13_Euryarchaeota_61_15_curated (50%)
2 1484 bp 51.42 4.75 90.16
bjp_ig2157_scaffold_17990
Phylum: Euryarchaeota (66.67%)
3 1496 bp 51.07 8.42 82.02
bjp_ig2157_scaffold_17703
Species: RBG_13_Euryarchaeota_31_8_curated (50%)
2 1515 bp 53.47 5.05 100.99
bjp_ig2157_scaffold_17507
Species: Thermococcus litoralis (100%)
1 1528 bp 53.47 6.28 99.93
bjp_ig2157_scaffold_17424
Species: BJP_IG2158_Thermoplasmatales_53_16 (100%)
1 1534 bp 55.54 6.36 97.20
bjp_ig2157_scaffold_17398
Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)
2 1536 bp 49.09 7.52 82.81
bjp_ig2157_scaffold_17372
Species: BJP_IG2158_Thermoplasmatales_53_16 (100%)
1 1537 bp 56.02 6.34 89.79
bjp_ig2157_scaffold_17206
Order: Thermoplasmatales (50%)
4 1549 bp 50.03 5.42 70.88
bjp_ig2157_scaffold_17109
Species: CG_Elusi_05 (100%)
2 1556 bp 47.37 7.33 100.06
bjp_ig2157_scaffold_16773
Species: Methanobacterium paludis (50%)
2 1580 bp 50.25 5.41 100.25
bjp_ig2157_scaffold_16418
Species: Natrinema gari (50%)
2 1606 bp 52.30 6.54 101.99
bjp_ig2157_scaffold_16115
Species: Methanotorris formicicus (50%)
2 1629 bp 53.41 5.89 89.13
bjp_ig2157_scaffold_16009
Phylum: Euryarchaeota (66.67%)
3 1638 bp 52.20 4.40 89.01
bjp_ig2157_scaffold_15988
Species: Thermoplasmatales archaeon SCGC AB-540-F20 (100%)
1 1640 bp 54.02 6.13 92.01
bjp_ig2157_scaffold_15989
Species: BJP_IG2158_Thermoplasmatales_53_16 (100%)
2 1640 bp 52.07 5.67 99.51
bjp_ig2157_scaffold_15640
Phylum: Euryarchaeota (75%)
4 1669 bp 52.55 5.30 83.22
bjp_ig2157_scaffold_15588
Species: Halococcus salifodinae (50%)
2 1675 bp 54.27 6.99 89.55
bjp_ig2157_scaffold_15519
Species: BJP_IG2158_Thermoplasmatales_53_16 (100%)
2 1680 bp 53.33 5.89 92.86
bjp_ig2157_scaffold_15494
Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)
2 1682 bp 56.30 7.49 98.63
bjp_ig2157_scaffold_15450
Species: BJP_IG2157_Anaerolineales_55_23 (50%)
2 1686 bp 54.57 5.34 98.58
bjp_ig2157_scaffold_15135
Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)
2 1714 bp 54.26 5.60 90.67
bjp_ig2157_scaffold_15089
Species: Thermoplasmatales archaeon SCGC AB-539-N05 (50%)
2 1718 bp 55.24 4.45 75.61
bjp_ig2157_scaffold_15006
Phylum: Euryarchaeota (50%)
4 1725 bp 50.72 5.04 80.93
bjp_ig2157_scaffold_14928
Species: BJP_IG2158_Thermoplasmatales_53_16 (100%)
1 1733 bp 53.32 4.15 79.28
bjp_ig2157_scaffold_14803
Species: BJP_IG2158_Thermoplasmatales_53_16 (100%)
1 1743 bp 55.71 4.04 99.83
bjp_ig2157_scaffold_14758
Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)
4 1747 bp 50.89 6.18 87.58
bjp_ig2157_scaffold_14372
Phylum: Euryarchaeota (100%)
3 1783 bp 55.47 6.31 91.53
bjp_ig2157_scaffold_14327
Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)
2 1787 bp 56.52 4.28 97.87
bjp_ig2157_scaffold_14339
Phylum: Euryarchaeota (66.67%)
3 1787 bp 54.73 6.46 95.69
bjp_ig2157_scaffold_14077
Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)
2 1813 bp 48.65 5.30 88.69
bjp_ig2157_scaffold_14079
Species: BJP_IG2158_Thermoplasmatales_53_16 (100%)
2 1813 bp 54.66 4.88 93.49
bjp_ig2157_scaffold_14016
Order: Thermococcales (66.67%)
3 1818 bp 53.30 8.00 97.36
bjp_ig2157_scaffold_13835
Species: Thermoplasmatales archaeon SCGC AB-540-F20 (50%)
2 1835 bp 51.06 6.78 75.53
bjp_ig2157_scaffold_13763
Species: RBG_19FT_COMBO_Euryarchaeota_56_21_curated (100%)
1 1842 bp 55.05 8.31 99.51
bjp_ig2157_scaffold_13633
Species: RBG_16_Euryarchaeota_62_10_curated (50%)
2 1853 bp 53.91 7.12 92.61
bjp_ig2157_scaffold_13544
Species: BJP_IG2069_Spirochaetales_48_31 (50%)
2 1862 bp 47.53 4.19 97.15
bjp_ig2157_scaffold_13462
Phylum: Euryarchaeota (66.67%)
3 1869 bp 53.99 6.58 97.91
Displaying items 51-100 of 246 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.