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rifcsphigho2_02_scaffold_3139

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_3139_1
unknown

Not on your lists

comp(3..122)
DNA (120bp) protein (40aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3139_2
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(132..536)
DNA (405bp) protein (135aa)
hypothetical protein
hypothetical protein; K07068 id=5241522 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein; K07068 Tax=AR10
rifcsphigho2_02_scaffold_3139_3
unknown

Not on your lists

comp(555..722)
DNA (168bp) protein (56aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3139_4
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(743..1915)
DNA (1173bp) protein (391aa)
acetyl-CoA C-acetyltransferase (EC:2.3.1.9)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] id=5241521 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=AR10
rifcsphigho2_02_scaffold_3139_5
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(1942..2982)
DNA (1041bp) protein (347aa)
hydroxymethylglutaryl-CoA synthase
hydroxymethylglutaryl-CoA synthase id=5241519 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hydroxymethylglutaryl-CoA synthase Tax=AR10
rifcsphigho2_02_scaffold_3139_6

Not on your lists

comp(3004..4293)
DNA (1290bp) protein (430aa)
hydroxymethylglutaryl-CoA reductase (EC:1.1.1.88)
hydroxymethylglutaryl-CoA reductase, degradative (EC:1.1.1.88); K00054 hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] id=5241518 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR1
rifcsphigho2_02_scaffold_3139_7
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4312..5643)
DNA (1332bp) protein (444aa)
Glutamate synthase [NADPH] small chain {ECO:0000313|EMBL:AKB60614.1}; EC=1.4.1.13 {ECO:0000313|EMBL:AKB60614.1};; TaxID=1434115 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Met
Glutamate synthase (NADPH) n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TJJ7_METAC
gltD; putative oxidoreductase
rifcsphigho2_02_scaffold_3139_8
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(5878..6231)
DNA (354bp) protein (118aa)
hypothetical protein
seg id=5241533 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
seg Tax=AR10
rifcsphigho2_02_scaffold_3139_9
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

6450..6938
DNA (489bp) protein (163aa)
hypothetical protein
Putative uncharacterized protein id=5241532 bin=GW2011_AR10_complete species=Candidatus Micrarchaeum acidiphilum genus=Candidatus Micrarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Putative uncharacterized protein Tax=AR10
rifcsphigho2_02_scaffold_3139_10
RBG_13_OP11_Beckwithbacteria_42_9_curated, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(6994..7161)
DNA (168bp) protein (56aa)
Tax=RBG_13_OP11_Beckwithbacteria_42_9_curated
rifcsphigho2_02_scaffold_3139_11
unknown

Not on your lists

comp(7309..7578)
DNA (270bp) protein (90aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3139_12

Not on your lists

7680..8489
DNA (810bp) protein (270aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=1457870 species="Archa
D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Pyrococcus furiosus RepID=DTDA_PYRFU
hypothetical protein
rifcsphigho2_02_scaffold_3139_13
unknown

Not on your lists

8553..9269
DNA (717bp) protein (239aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3139_14

Not on your lists

comp(9311..11782)
DNA (2472bp) protein (824aa)
Geranylgeranyl diphosphate synthase, type I {ECO:0000313|EMBL:KHO55006.1}; EC=2.5.1.1 {ECO:0000313|EMBL:KHO55006.1};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
geranylgeranyl diphosphate synthase, type I (EC:2.5.1.1)
polyprenyl synthetase; K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] id=5241589 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_3139_15
unknown

Not on your lists

comp(11847..12053)
DNA (207bp) protein (69aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3139_16
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12182..12883
DNA (702bp) protein (234aa)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408}
Thymidylate synthase ThyX n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PZD2_9CLOT
thymidylate synthase, flavin-dependent
rifcsphigho2_02_scaffold_3139_17
unknown

Not on your lists

comp(12886..13341)
DNA (456bp) protein (152aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3139_18
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

13462..16602
DNA (3141bp) protein (1047aa)
pyruvate,orthophosphate dikinase (EC:2.7.9.1)
pyruvate, phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] id=5241516 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
pyruvate, phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] Tax=AR10
rifcsphigho2_02_scaffold_3139_19

Not on your lists

16606..17397
DNA (792bp) protein (264aa)
Marine sediment metagenome DNA, contig: S01H1_L03558 {ECO:0000313|EMBL:GAF72512.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Pyruvate phosphate dikinase id=4372515 bin=GWF2_WWE1_40_14 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=GWF2_WWE1_40_14 organism_group=WWE1
ppdK; pyruvate, phosphate dikinase
rifcsphigho2_02_scaffold_3139_20
unknown

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comp(17549..18247)
DNA (699bp) protein (233aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3139_21

Not on your lists

comp(18326..18985)
DNA (660bp) protein (220aa)
Putative uncharacterized protein id=4845862 bin=PER_GWC2_41_7 species=Candidatus Parvarchaeum acidophilus genus=Candidatus Parvarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Uncharacterized protein {ECO:0000313|EMBL:KHO48439.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
Hypothetical Protein
rifcsphigho2_02_scaffold_3139_22
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

19022..20422
DNA (1401bp) protein (467aa)
hypothetical protein
hypothetical protein id=5241513 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein Tax=AR10
rifcsphigho2_02_scaffold_3139_23
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(20431..21114)
DNA (684bp) protein (228aa)
hypothetical protein
Putative uncharacterized protein id=5241512 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Putative uncharacterized protein Tax=AR10
rifcsphigho2_02_scaffold_3139_24

Not on your lists

comp(21114..21815)
DNA (702bp) protein (234aa)
KaiC protein {ECO:0000313|EMBL:KHO55281.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
KaiC protein
KaiC domain-containing protein id=5241511 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_3139_25
R_OD1_Nomurabacteria_33_24, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(22077..23246)
DNA (1170bp) protein (390aa)
glycosyltransferase Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_33_24_curated
Glycosyl transferase group 1 id=1827485 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
glycosyl transferase group 1
rifcsphigho2_02_scaffold_3139_26
Pyrococcus horikoshii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(23322..23663)
DNA (342bp) protein (114aa)
Putative uncharacterized protein PH1844 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O59512_PYRHO
hypothetical protein
Putative uncharacterized protein PH1844 {ECO:0000313|EMBL:BAA30965.1}; TaxID=70601 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus horik
rifcsphigho2_02_scaffold_3139_27
unknown

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comp(23752..24462)
DNA (711bp) protein (237aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3139_28
unknown

Not on your lists

comp(24495..24935)
DNA (441bp) protein (147aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3139_29
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

25089..25370
DNA (282bp) protein (94aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein id=5044251 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_3139_30
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

25367..25705
DNA (339bp) protein (113aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
hypothetical protein id=5241183 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Displaying items 1-30 of 31 in total

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