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rifcsphigho2_02_scaffold_32213

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_32213_1

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comp(98..775)
DNA (678bp) protein (226aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55770.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
large subunit ribosomal protein L32e
50S ribosomal protein L32e; K02912 large subunit ribosomal protein L32e id=5241368 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_32213_2
Methanotorris formicicus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(775..1311)
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1KXV8_9EURY
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=647171 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris f
50S ribosomal protein L6
rifcsphigho2_02_scaffold_32213_3

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comp(1348..1776)
DNA (429bp) protein (143aa)
30S ribosomal protein S8 n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BD85_METIK
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8
rifcsphigho2_02_scaffold_32213_4
CG_Micra_03, Micraarchaeota, Archaea

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comp(1807..1965)
DNA (159bp) protein (53aa)
40S ribosomal protein S29 n=1 Tax=mine drainage metagenome RepID=T1B0J0_9ZZZZ
small subunit ribosomal protein S14
TDEL0E01260; 40S ribosomal protein S29 Tax=CG_Micra_03
rifcsphigho2_02_scaffold_32213_5

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comp(1962..2477)
DNA (516bp) protein (172aa)
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
large subunit ribosomal protein L5
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=5241364 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_32213_6

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comp(2501..3226)
DNA (726bp) protein (242aa)
small subunit ribosomal protein S4e
30S ribosomal protein S4; K02987 small subunit ribosomal protein S4e id=5241363 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_32213_7

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comp(3227..3607)
DNA (381bp) protein (127aa)
50S ribosomal protein L24P n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=RL24_KORCO
50S ribosomal protein L24P {ECO:0000313|EMBL:CEG13274.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
50S ribosomal protein L24
rifcsphigho2_02_scaffold_32213_8

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comp(3644..4042)
DNA (399bp) protein (133aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
50S ribosomal protein L14, large subunit ribosomal protein L14
rpl14p; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5241361 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_32213_9

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comp(4079..4537)
DNA (459bp) protein (153aa)
30S ribosomal protein S17P n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZC8_METFV
30S ribosomal protein S17P {ECO:0000313|EMBL:AJS11812.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17
rifcsphigho2_02_scaffold_32213_10
AR10, Diapherotrites, DPANN, Archaea

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comp(4524..4832)
DNA (309bp) protein (103aa)
ribonuclease P protein subunit POP4 (EC:3.1.26.5)
ribonuclease P, Rpp29; K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] id=5241359 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
ribonuclease P, Rpp29; K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] Tax=AR10
rifcsphigho2_02_scaffold_32213_11
AR10, Diapherotrites, DPANN, Archaea

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comp(4825..5127)
DNA (303bp) protein (101aa)
translation initiation factor 1
translation initiation factor 1 (eif-1/sui1); K03113 translation initiation factor 1 id=5241358 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
translation initiation factor 1 (eif-1/sui1); K03113 translation initiation factor 1 Tax=AR10
rifcsphigho2_02_scaffold_32213_12
Plasmodium vivax, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

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comp(5177..5590)
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Plasmodium vivax (strain Salvador I) RepID=A5K0X8_PLAVS
Uncharacterized protein {ECO:0000313|EMBL:EDL46975.1}; TaxID=126793 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium).;" source=
hypothetical protein
rifcsphigho2_02_scaffold_32213_13

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comp(5587..6162)
DNA (576bp) protein (192aa)
30S ribosomal protein S3P {ECO:0000313|EMBL:AJS11811.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
small subunit ribosomal protein S3
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 id=5241356 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Displaying 13 items

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