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rifcsphigho2_02_scaffold_6696

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_6696_1
RifOxyA12_full_Elusimicrobia_57_11_curated, Elusimicrobia, Bacteria

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2..2065
DNA (2064bp) protein (688aa)
Rhs family protein id=5043762 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=RifOxyA12_full_Elusimicrobia_57_11_curated
rifcsphigho2_02_scaffold_6696_2
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2088..3230)
DNA (1143bp) protein (381aa)
trm1; N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC:2.1.1.32); K00555 tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] Tax=CG_Woesearch_02
tRNA (guanine(26)-N(2)/guanine(27)-N(2))-dimethyltransferase id=5800001 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
trm1; N(2),N(2)-dimethylguanosine tRNA methyltransferase
rifcsphigho2_02_scaffold_6696_3
RBG_13_OP11_40_7b_curated, Microgenomates, Bacteria

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3323..3721
DNA (399bp) protein (133aa)
Putative NUDIX hydrolase n=6 Tax=Vibrio nigripulchritudo RepID=U4KFE4_9VIBR
hypothetical protein Tax=RBG_13_OP11_40_7b_curated
putative NUDIX hydrolase
rifcsphigho2_02_scaffold_6696_4
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

3836..5572
DNA (1737bp) protein (579aa)
Probable translation initiation factor IF-2 id=5800003 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Probable translation initiation factor IF-2 Tax=AR15
putative translation initiation factor IF-2
rifcsphigho2_02_scaffold_6696_5
CG_Woesearch_02, Woesearchaeota, Archaea

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5687..6181
DNA (495bp) protein (165aa)
hypothetical protein Tax=CG_Woesearch_02
Putative uncharacterized protein id=5800004 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_6696_6
unknown

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comp(6141..7499)
DNA (1359bp) protein (453aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6696_7
unknown

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comp(7616..7921)
DNA (306bp) protein (102aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6696_8

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comp(8006..8398)
DNA (393bp) protein (131aa)
Putative uncharacterized protein id=5800008 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61339.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
rifcsphigho2_02_scaffold_6696_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(8401..8643)
DNA (243bp) protein (81aa)
hypothetical protein
id=5800009 Tax=RBG_13_Woesearchaeota_36_6_curated
id=5800009 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_6696_10
unknown

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8871..9125
DNA (255bp) protein (85aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6696_trna_1
unknown

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9020..9093
DNA (74bp)
transferRNA
rifcsphigho2_02_scaffold_6696_11
CG_Woesearch_02, Woesearchaeota, Archaea

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9162..10052
DNA (891bp) protein (297aa)
ATP binding protein Tax=CG_Woesearch_02
Asparagine synthase id=5800156 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ATP binding protein
rifcsphigho2_02_scaffold_6696_12
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

10219..10584
DNA (366bp) protein (122aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsphigho2_02_scaffold_6696_13
AR15, Woesearchaeaota, DPANN, Archaea

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10581..11282
DNA (702bp) protein (234aa)
ATPase, AAA-type, core id=5799675 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ATPase, AAA-type, core Tax=AR15
rifcsphigho2_02_scaffold_6696_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

11266..12183
DNA (918bp) protein (306aa)
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
Uncharacterized protein id=5799674 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_6696_15
Methanocaldococcus vulcanius, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(12187..13272)
DNA (1086bp) protein (362aa)
Small GTP-binding protein n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RER7_METVM
small GTP-binding protein
Small GTP-binding protein {ECO:0000313|EMBL:ACX72069.1}; TaxID=579137 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldoc
rifcsphigho2_02_scaffold_6696_16
unknown

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13432..13788
DNA (357bp) protein (119aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6696_17

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comp(13802..14071)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000367DEF5
Uncharacterized protein {ECO:0000313|EMBL:KHO46560.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_6696_18

Not on your lists

14178..14513
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003610899
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO46559.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_6696_19
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(14532..14789)
DNA (258bp) protein (86aa)
hypothetical protein; K09721 hypothetical protein Tax=CG_Woesearch_01
hypothetical protein; K09721 hypothetical protein id=5044066 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_6696_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(14770..15117)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000371FCFD
prefoldin subunit beta; K04798 prefoldin beta subunit Tax=CG_Woesearch_02
Prefoldin subunit beta
rifcsphigho2_02_scaffold_6696_21
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(15114..15338)
DNA (225bp) protein (75aa)
Marine sediment metagenome DNA, contig: S01H1_S17826 Tax=CG_Woesearch_02
rifcsphigho2_02_scaffold_6696_22

Not on your lists

comp(15339..15476)
DNA (138bp) protein (46aa)
hypothetical protein
Marine sediment metagenome DNA, contig: S01H1_S17826 {ECO:0000313|EMBL:GAG16421.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
RNA polymerase Rbp10 id=5799817 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_6696_23
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(15478..15753)
DNA (276bp) protein (92aa)
50S ribosomal protein L37Ae n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LHQ8_THEBM id=5103031 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
LSU ribosomal protein l37ae; K02921 large subunit ribosomal protein L37Ae Tax=CG_Woesearch_01
50S ribosomal protein L37Ae
Displaying 24 items

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