ggKbase home page

MPJ_scaffold_439

Alias: MPJ_Methanosaeta_harundinacea_57_690_57

Search features with annotation key words

Displaying 30 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPJ_scaffold_439_1
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83..2146)
DNA (2064bp) protein (688aa)
putative type I restriction-modification enzyme subunit R (EC:3.1.21.3) Tax=CG_Delta_02
HsdR family type I site-specific deoxyribonuclease
Type I site-specific deoxyribonuclease, HsdR family
MPJ_scaffold_439_2
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2143..3417)
DNA (1275bp) protein (425aa)
Type I restriction-modification system, specificity subunit S {ECO:0000313|EMBL:AKB31596.1}; EC=3.1.21.3 {ECO:0000313|EMBL:AKB31596.1};; TaxID=1434119 species="Archaea; Euryarchaeota; Methanomicrobia;
hsdS; type I restriction-modification system subunit S
Uncharacterized protein
MPJ_scaffold_439_3
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3408..5786)
DNA (2379bp) protein (793aa)
type I restriction system adenine methylase HsdM Tax=CG_Beta_01
type I restriction system adenine methylase HsdM
Type I RM system M subunit
MPJ_scaffold_439_4
Thermotoga sp. RQ7, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

6203..6601
DNA (399bp) protein (133aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJG40394.1}; TaxID=126738 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga sp. RQ7.;"
Protein of hypothetical function DUF523
MPJ_scaffold_439_5
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6863..8725
DNA (1863bp) protein (621aa)
S-layer protein
S-layer-related duplication domain protein {ECO:0000313|EMBL:AET63940.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="M
S-layer-related duplication domain protein
MPJ_scaffold_439_6
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8727..10481
DNA (1755bp) protein (585aa)
S-layer-like domain-containing protein
S-layer-related duplication domain {ECO:0000313|EMBL:ABK14467.1}; Flags: Precursor;; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;"
S-layer-related duplication domain
MPJ_scaffold_439_7
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10566..10739
DNA (174bp) protein (58aa)
Iron sulfur flavoprotein
Iron sulfur flavoprotein {ECO:0000313|EMBL:AET64167.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harund
Iron sulfur flavoprotein
MPJ_scaffold_439_8
unknown

Not on your lists

11565..11984
DNA (420bp) protein (140aa)
MPJ_scaffold_439_9
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12120..12779)
DNA (660bp) protein (220aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET63660.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundi
Uncharacterized protein
MPJ_scaffold_439_10
unknown

Not on your lists

comp(12763..12870)
DNA (108bp) protein (36aa)
MPJ_scaffold_439_11
unknown

Not on your lists

comp(12921..13301)
DNA (381bp) protein (127aa)
MPJ_scaffold_439_12
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

Not on your lists

comp(13852..14748)
DNA (897bp) protein (299aa)
hypothetical protein Tax=RBG_13_Euryarchaeota_57_23_curated
hypothetical protein
Uncharacterized protein
MPJ_scaffold_439_13
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14980..16947)
DNA (1968bp) protein (656aa)
DNA polymerase B {ECO:0000313|EMBL:AET64941.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (
DNA polymerase B
DNA polymerase B
MPJ_scaffold_439_14
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16934..17188)
DNA (255bp) protein (85aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET64940.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundi
Uncharacterized protein
MPJ_scaffold_439_15
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17188..17700)
DNA (513bp) protein (171aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET64939.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundi
Uncharacterized protein
MPJ_scaffold_439_16
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17972..18157
DNA (186bp) protein (62aa)
DNA polymerase beta domain-containing protein region
DNA polymerase beta domain protein region {ECO:0000313|EMBL:AET65194.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Me
DNA polymerase beta domain protein region
MPJ_scaffold_439_17
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

18261..18476
DNA (216bp) protein (72aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIG97952.1}; TaxID=1344584 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus D
UPF0150 protein AF_1072
MPJ_scaffold_439_18
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18454..18687
DNA (234bp) protein (78aa)
Putative periplasmic or secreted lipoprotein {ECO:0000313|EMBL:ETA66800.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" sourc
hypothetical protein
YcfA family protein
MPJ_scaffold_439_19
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18893..19057
DNA (165bp) protein (55aa)
Acetyl-CoA hydrolase/transferase
Acetyl-CoA hydrolase/transferase {ECO:0000313|EMBL:AET65196.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaet
Acetyl-CoA hydrolase/transferase
MPJ_scaffold_439_20
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19299..20273)
DNA (975bp) protein (325aa)
Putative methanogenesis marker protein 12 rbh
UPF0285 protein Mhar_0949 {ECO:0000256|HAMAP-Rule:MF_01087}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta h
Putative methanogenesis marker protein 12
MPJ_scaffold_439_21
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20290..21177)
DNA (888bp) protein (296aa)
LPPG:Fo 2-phospho-L-lactate transferase rbh
LPPG:Fo 2-phospho-L-lactate transferase {ECO:0000313|EMBL:AET64321.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Meth
LPPG:Fo 2-phospho-L-lactate transferase
MPJ_scaffold_439_22
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21288..21866)
DNA (579bp) protein (193aa)
ZPR1-related zinc finger protein
ZPR1-related zinc finger protein {ECO:0000313|EMBL:AET64322.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaet
ZPR1-related zinc finger protein
MPJ_scaffold_439_23
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21863..22225)
DNA (363bp) protein (121aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET64323.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundi
Uncharacterized protein
MPJ_scaffold_439_24
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22292..22477)
DNA (186bp) protein (62aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET64324.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundi
Uncharacterized protein
MPJ_scaffold_439_25
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22539..23504)
DNA (966bp) protein (322aa)
FO synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}; EC=2.5.1.77 {ECO:0000256|HAMAP-Rule:MF_01611};; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}
FO synthase subunit 1 rbh
FO synthase subunit 1
MPJ_scaffold_439_26
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23571..24020)
DNA (450bp) protein (150aa)
hypothetical protein
UPF0179 protein Mhar_0955 {ECO:0000256|HAMAP-Rule:MF_00498}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta h
UPF0179 protein Mhar_0955
MPJ_scaffold_439_27
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24042..25052)
DNA (1011bp) protein (337aa)
Glycerol-1-phosphate dehydrogenase [NAD(P)]
Glycerol-1-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00497, ECO:0000256|SAAS:SAAS00015263}; Short=G1P dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00497};; Short=G1PDH {ECO:0000256|HAMA
Glycerol-1-phosphate dehydrogenase [NAD(P)+]
MPJ_scaffold_439_28
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25228..25986)
DNA (759bp) protein (253aa)
ABC transporter ATP-binding protein rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AET64328.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methano
ABC transporter, ATP-binding protein
MPJ_scaffold_439_29

Not on your lists

26112..26564
DNA (453bp) protein (151aa)
Marine sediment metagenome DNA, contig: S01H1_S33231 {ECO:0000313|EMBL:GAG31824.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Uncharacterized protein
MPJ_scaffold_439_30
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(26667..27716)
DNA (1050bp) protein (350aa)
transposase
Transposase
Tax=BJP_IG2158_Thermoplasmatales_53_16
Displaying 30 items

View Taxonomy