ggKbase home page

13_1_40cm_4_scaffold_179

Search features with annotation key words

Displaying items 1-30 of 45 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_179_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

2..100
DNA (99bp) protein (33aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHA0_NITGG
4Fe-4S ferredoxin
Putative ferredoxin {ECO:0000313|EMBL:AFU59223.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera garg
13_1_40cm_4_scaffold_179_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

158..2245
DNA (2088bp) protein (696aa)
Glycosyl transferase family 2 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INE3_NITGG
family 2 glycosyl transferase rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:AFU59224.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososp
13_1_40cm_4_scaffold_179_3
unknown

Not on your lists

2324..3319
DNA (996bp) protein (332aa)

This feature has no annotations

13_1_40cm_4_scaffold_179_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

3543..4211
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH64_NITGG
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU59225.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_179_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

4211..5848
DNA (1638bp) protein (546aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICY4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59226.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_179_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

6282..6593
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJD0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59228.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_179_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

6963..7184
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH69_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59230.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_179_trna_1
unknown

Not on your lists

comp(7166..7240)
DNA (75bp)
transferRNA
13_1_40cm_4_scaffold_179_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(7283..7909)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICY7_NITGG
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU59231.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_179_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(7940..8938)
DNA (999bp) protein (333aa)
hemB1; delta-aminolevulinic acid dehydratase (EC:4.2.1.24) rbh
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales;
Delta-aminolevulinic acid dehydratase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKZ6_NITGG
13_1_40cm_4_scaffold_179_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(8922..10235)
DNA (1314bp) protein (438aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70) rbh
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
Glutamyl-tRNA reductase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJD3_NITGG
13_1_40cm_4_scaffold_179_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(10211..10882)
DNA (672bp) protein (224aa)
Putative siroheme synthase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INE5_NITGG
siroheme synthase
Putative siroheme synthase {ECO:0000313|EMBL:AFU59234.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphae
13_1_40cm_4_scaffold_179_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


comp(10957..11613)
DNA (657bp) protein (219aa)
Transcription elongation factor Spt5 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH71_NITGG
nusG; transcription antitermination protein NusG
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source
13_1_40cm_4_scaffold_179_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

11748..12509
DNA (762bp) protein (254aa)
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
Putative D-tyrosyl-tRNA(Tyr) deacylase {ECO:0000313|EMBL:AFU59237.1}; EC=3.1.-.- {ECO:0000313|EMBL:AFU59237.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nit
Putative D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL02_NITGG
13_1_40cm_4_scaffold_179_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

12540..12866
DNA (327bp) protein (109aa)
Putative methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJD6_NITGG
methylated-DNA--protein-cysteine methyltransferase
Putative methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:AFU59238.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitro
13_1_40cm_4_scaffold_179_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(12863..13309)
DNA (447bp) protein (149aa)
50S ribosomal protein L19e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0INE6_NITGG
rpl19e; 50S ribosomal protein L19e
R-protein L19e {ECO:0000313|EMBL:ADK26036.1}; Flags: Fragment;; TaxID=497727 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candida
13_1_40cm_4_scaffold_179_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(13309..13752)
DNA (444bp) protein (148aa)
50S ribosomal protein L32e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IH73_NITGG
rpl32e; 50S ribosomal protein L32e
R-protein L32e {ECO:0000313|EMBL:ADK26046.1}; Flags: Fragment;; TaxID=497727 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candida
13_1_40cm_4_scaffold_179_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(13766..14080)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICZ4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59241.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_179_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

14229..15641
DNA (1413bp) protein (471aa)
Putative gas vesicle protein GvpD n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL09_NITGG
gvpD; gas vesicle protein GvpD
Putative gas vesicle protein GvpD {ECO:0000313|EMBL:AFU59242.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitro
13_1_40cm_4_scaffold_179_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(15642..15983)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJD8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59243.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_179_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(16095..16331)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INE7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59244.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_179_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(16483..18006)
DNA (1524bp) protein (508aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH76_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59245.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_179_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(18088..18789)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICZ8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59246.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_179_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

18936..19574
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL11_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59247.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_179_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

19552..21042
DNA (1491bp) protein (497aa)
Putative glycosyl transferase group 1 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJE0_NITGG
glycosyl transferase group 1
Putative glycosyl transferase group 1 {ECO:0000313|EMBL:AFU59248.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="N
13_1_40cm_4_scaffold_179_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

21039..22013
DNA (975bp) protein (325aa)
Putative UDP-glucose 4-epimerase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INE8_NITGG
UDP-glucose 4-epimerase
Putative UDP-glucose 4-epimerase {ECO:0000313|EMBL:AFU59249.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitros
13_1_40cm_4_scaffold_179_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

22014..23657
DNA (1644bp) protein (548aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH79_NITGG
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU59250.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_179_27
unknown

Not on your lists

comp(24054..24182)
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_40cm_4_scaffold_179_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

24368..25267
DNA (900bp) protein (300aa)
Putative serine/threonine-protein phosphatase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL14_NITGG
serine/threonine-protein phosphatase
Putative serine/threonine-protein phosphatase {ECO:0000313|EMBL:AFU59252.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" s
13_1_40cm_4_scaffold_179_29
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(25545..26075)
DNA (531bp) protein (177aa)
Transcription factor IIB, cyclin-like protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJE2_NITGG
tfb8; transcription factor IIB, cyclin-like protein
Transcription factor IIB, cyclin-like protein {ECO:0000313|EMBL:AFU59253.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" s
Displaying items 1-30 of 45 in total

View Taxonomy