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13_1_40cm_3_scaffold_1432

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1432_1
RBG_16_Archaea_50_20_curated, Archaea

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comp(1..471)
DNA (471bp) protein (157aa)
ABC transporter related n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RY35_THEPD
ABC transporter-like protein; K02006 cobalt/nickel transport system ATP-binding protein Tax=RBG_16_Archaea_50_20_curated
ABC transporter-like protein
13_1_40cm_3_scaffold_1432_2
RBG_16_Archaea_50_20_curated, Archaea

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comp(567..1433)
DNA (867bp) protein (289aa)
Cobalt/nickel ABC transporter ATP-binding protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8Z3_9ARCH
ABC transporter; K02006 cobalt/nickel transport system ATP-binding protein Tax=RBG_16_Archaea_50_20_curated
cobalt/nickel ABC transporter ATP-binding protein
13_1_40cm_3_scaffold_1432_3
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(1492..2295)
DNA (804bp) protein (268aa)
Predicted phosphoesterase, DHH family n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BKC6_HYPBU
DHH family phosphoesterase; K06881 phosphoesterase RecJ domain-containing protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
DHH family phosphoesterase
13_1_40cm_3_scaffold_1432_4
RBG_16_Archaea_50_20_curated, Archaea

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comp(3194..3661)
DNA (468bp) protein (156aa)
50S ribosomal protein L37Ae n=1 Tax=Thermofilum sp. 1910b RepID=S5ZKQ1_9CREN
rpl37ae; 50S ribosomal protein L37Ae; K02921 large subunit ribosomal protein L37Ae Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L37
13_1_40cm_3_scaffold_1432_5
RBG_16_Archaea_50_20_curated, Archaea

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comp(3661..4479)
DNA (819bp) protein (273aa)
Exosome complex component Rrp42 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AH19_PYRYC
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 Tax=RBG_16_Archaea_50_20_curated
exosome complex RNA-binding protein Rrp42
13_1_40cm_3_scaffold_1432_6
RBG_16_Archaea_50_20_curated, Archaea

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comp(4479..5255)
DNA (777bp) protein (259aa)
Exosome complex component Rrp41 n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZKB6_THELI
rph; exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 Tax=RBG_16_Archaea_50_20_curated
exosome complex exonuclease Rrp41
13_1_40cm_3_scaffold_1432_7
RBG_16_Archaea_50_20_curated, Archaea

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comp(5224..5937)
DNA (714bp) protein (238aa)
Exosome complex component Rrp4 n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECM8_PYRF1
KH domain containing protein; K03679 exosome complex component RRP4 Tax=RBG_16_Archaea_50_20_curated
KH domain containing protein
13_1_40cm_3_scaffold_1432_8
RBG_16_Archaea_50_20_curated, Archaea

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comp(5950..6639)
DNA (690bp) protein (230aa)
Putative ribosome maturation protein SDO1 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJH0_NITGG
ribosome maturation protein SDO1 Tax=RBG_16_Archaea_50_20_curated
rRNA metabolism protein, SBDS family
13_1_40cm_3_scaffold_1432_9
RBG_16_Archaea_50_20_curated, Archaea

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comp(6636..7379)
DNA (744bp) protein (248aa)
psmA; proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] Tax=RBG_16_Archaea_50_20_curated
proteasome alpha subunit (EC:3.4.25.1)
Proteasome alpha subunit n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8Y4_9ARCH
13_1_40cm_3_scaffold_1432_10
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(7597..8025)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LHP8_THEBM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADT83132.1}; TaxID=391623 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus barophilus (stra
13_1_40cm_3_scaffold_1432_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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8119..8484
DNA (366bp) protein (122aa)
peptidyl-tRNA hydrolase; K04794 peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Peptidyl-tRNA hydrolase n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LL75_THEBM
peptidyl-tRNA hydrolase
13_1_40cm_3_scaffold_1432_12
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(8458..8808)
DNA (351bp) protein (117aa)
Marine sediment metagenome DNA, contig: S12H4_L00878 Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_3_scaffold_1432_13
unknown

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comp(8832..10658)
DNA (1827bp) protein (609aa)

This feature has no annotations

13_1_40cm_3_scaffold_1432_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10930..12057)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH89_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57157.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1432_15
RBG_16_Archaea_50_20_curated, Archaea

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12095..12859
DNA (765bp) protein (255aa)
Hypothetical conserved protein n=1 Tax=uncultured crenarchaeote RepID=H5SJ42_9CREN
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
putative circadian clock protein, KaiC
13_1_40cm_3_scaffold_1432_16
RBG_16_Archaea_50_20_curated, Archaea

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comp(12865..13902)
DNA (1038bp) protein (346aa)
Universally conserved protein n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BKD6_HYPBU
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_3_scaffold_1432_17
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(13969..14709)
DNA (741bp) protein (247aa)
Putative uncharacterized protein PH0833 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58563_PYRHO
circadian clock protein KaiC Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_40cm_3_scaffold_1432_18
unknown

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comp(14709..14972)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_3_scaffold_1432_19
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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15041..15880
DNA (840bp) protein (280aa)
Isopentenyl phosphate kinase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7A6_METSW
hypothetical protein; K06981 Tax=RBG_16_Bathyarchaeota_57_9_curated
isopentenyl phosphate kinase
13_1_40cm_3_scaffold_1432_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(15843..16853)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5ZVR1_9CREN
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_3_scaffold_1432_21
unknown

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16965..17321
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_40cm_3_scaffold_1432_22
RBG_16_Archaea_50_20_curated, Archaea

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17514..18887
DNA (1374bp) protein (458aa)
NADP-dependent malic enzyme n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8J1_9EURY
NADP-dependent malic enzyme Tax=RBG_16_Archaea_50_20_curated
NADP-dependent malic enzyme
13_1_40cm_3_scaffold_1432_23
RBG_16_Archaea_50_20_curated, Archaea

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18890..19555
DNA (666bp) protein (222aa)
Predicted dinucleotide-binding enzyme n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TYQ9_METKA
dinucleotide-binding protein; K06988 Tax=RBG_16_Archaea_50_20_curated
dinucleotide-binding protein
13_1_40cm_3_scaffold_1432_24
RBG_16_Archaea_50_20_curated, Archaea

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19569..20771
DNA (1203bp) protein (401aa)
Translation-associated GTPase n=1 Tax=Thermofilum sp. 1910b RepID=S5ZE34_9CREN
GTP binding protein Tax=RBG_16_Archaea_50_20_curated
ychF; translation-associated GTPase
13_1_40cm_3_scaffold_1432_25
RBG_16_Archaea_50_20_curated, Archaea

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comp(20942..21532)
DNA (591bp) protein (197aa)
30S ribosomal protein S24e; K02974 small subunit ribosomal protein S24e Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_1432_26
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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comp(21529..21963)
DNA (435bp) protein (145aa)
30S ribosomal protein S6e n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RS6E_METKA
RPS6A; 30S ribosomal protein S6; K02991 small subunit ribosomal protein S6e Tax=RBG_16_Bathyarchaeota_57_9_curated
RPS6A; 30S ribosomal protein S6
13_1_40cm_3_scaffold_1432_27
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(22028..23806)
DNA (1779bp) protein (593aa)
Probable translation initiation factor IF-2 n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=IF2P_IGNH4 rbh
translation initiation factor IF-2; K03243 translation initiation factor 5B Tax=RBG_13_Bathyarchaeota_38_9_curated
translation initiation factor IF-2
13_1_40cm_3_scaffold_1432_28
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(23886..24302)
DNA (417bp) protein (139aa)
ndk; nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RBG_16_Bathyarchaeota_48_13_curated
ndk; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase (EC:2.7.4.6)
UPI00034F2350 related cluster n=1 Tax=unknown RepID=UPI00034F2350
13_1_40cm_3_scaffold_1432_29
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(24469..24693)
DNA (225bp) protein (75aa)
30S ribosomal protein S28e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IIL4_NITGG
30S ribosomal protein S28e; K02979 small subunit ribosomal protein S28e Tax=RBG_13_Bathyarchaeota_38_9_curated
rps28e; 30S ribosomal protein S28e
13_1_40cm_3_scaffold_1432_30
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists


comp(24690..25079)
DNA (390bp) protein (130aa)
50S ribosomal protein L7Ae n=1 Tax=Pyrobaculum oguniense (strain DSM 13380 / JCM 10595 / TE7) RepID=H6Q701_PYROT
50S ribosomal protein L7Ae; K02936 large subunit ribosomal protein L7Ae Tax=RBG_13_Bathyarchaeota_38_9_curated
50S ribosomal protein L7Ae
Displaying items 1-30 of 34 in total

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