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13_1_40cm_3_scaffold_1813

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1813_1
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3..614)
DNA (612bp) protein (204aa)
Phosphate uptake regulator, PhoU n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAS5_METMS
phosphate uptake regulator, PhoU
Phosphate uptake regulator, PhoU {ECO:0000313|EMBL:ADE36276.1}; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalophilus.;" source="Metha
13_1_40cm_3_scaffold_1813_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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1248..1799
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CUC2_METMJ
hypothetical protein; K07220 hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
13_1_40cm_3_scaffold_1813_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1816..2826
DNA (1011bp) protein (337aa)
Phosphate/sulphate permease id=3122079 bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphate/sulphate permease; K03306 inorganic phosphate transporter, PiT family Tax=GWA2_Rokubacteria_70_23_curated
pit; low-affinity phosphate transporter
13_1_40cm_3_scaffold_1813_4
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2947..3576)
DNA (630bp) protein (210aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumil
hypothetical protein
Putative DNA methylase id=3905982 bin=GWF2_Melioribacter_38_21 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
13_1_40cm_3_scaffold_1813_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3886..5037
DNA (1152bp) protein (384aa)
Putative transposase, IS605 OrfB family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFZ7_NITGG
transposase, IS605 OrfB family
Putative transposase, IS605 OrfB family {ECO:0000313|EMBL:AFU60326.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
13_1_40cm_3_scaffold_1813_6
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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5176..5445
DNA (270bp) protein (90aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6) Tax=RBG_16_Bathyarchaeota_48_13_curated
DNA-directed RNA polymerase subunit H n=1 Tax=Desulfurococcus mucosus (strain ATCC 35584 / DSM 2162 / JCM 9187 / O7/1) RepID=E8R7R7_DESM0
DNA-directed RNA polymerase subunit H
13_1_40cm_3_scaffold_1813_7
RBG_16_Archaea_50_20_curated, Archaea

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5471..8818
DNA (3348bp) protein (1116aa)
rpoB; DNA-directed RNA polymerase subunit B (EC:2.7.7.6) Tax=RBG_16_Archaea_50_20_curated
rpoB; DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
Putative DNA-directed RNA polymerase subunit B n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARL3_9ARCH
13_1_40cm_3_scaffold_1813_8
RBG_16_Archaea_50_20_curated, Archaea

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8821..12666
DNA (3846bp) protein (1282aa)
rpoA; DNA-directed RNA polymerase subunit A (EC:2.7.7.6) Tax=RBG_16_Archaea_50_20_curated
rpoA; DNA-directed RNA polymerase subunit A (EC:2.7.7.6)
DNA-directed RNA polymerase n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IC33_NITGG
13_1_40cm_3_scaffold_1813_9
RBG_16_Archaea_50_20_curated, Archaea

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12673..12975
DNA (303bp) protein (101aa)
50S ribosomal protein L30e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR6_METFV
50S ribosomal protein L30e; K02908 large subunit ribosomal protein L30e Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L30e
13_1_40cm_3_scaffold_1813_10
RBG_16_Archaea_50_20_curated, Archaea

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12975..13412
DNA (438bp) protein (146aa)
NusA family KH domain protein n=1 Tax=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) RepID=A4YCR2_METS5
transcription elongation factor NusA-like protein; K02600 N utilization substance protein A Tax=RBG_16_Archaea_50_20_curated
transcription elongation factor NusA-like protein
Displaying 10 items

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