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13_1_40cm_3_scaffold_209

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_209_1
Ignisphaera aggregans, Ignisphaera, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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3..440
DNA (438bp) protein (146aa)
ATPase n=1 Tax=Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1) RepID=E0SSM9_IGNAA
ATPase
ATPase {ECO:0000313|EMBL:ADM28614.1}; TaxID=583356 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Ignisphaera.;" source="Ignisphaera aggregans (strain DSM 17230
13_1_40cm_3_scaffold_209_2
unknown

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comp(807..1997)
DNA (1191bp) protein (397aa)

This feature has no annotations

13_1_40cm_3_scaffold_209_3
unknown

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comp(2051..2572)
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_40cm_3_scaffold_209_4

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3028..3633
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=3 Tax=Burkholderia RepID=B1FSZ0_9BURK id=53324 bin=ACD41 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Uncharacterized protein {ECO:0000313|EMBL:EKD78545.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_40cm_3_scaffold_209_5
unknown

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3838..4242
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_40cm_3_scaffold_209_6
RBG_16_Archaea_50_20_curated, Archaea

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4265..5773
DNA (1509bp) protein (503aa)
SMP-30/Gluconolaconase/LRE domain protein n=1 Tax=Frankia sp. EUN1f RepID=D3CTQ1_9ACTO
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_209_7
RBG_16_Archaea_50_20_curated, Archaea

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comp(5779..6087)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Halobacterium sp. DL1 RepID=G4IAF8_9EURY
rps10p; 30S ribosomal protein S10P; K02946 small subunit ribosomal protein S10 Tax=RBG_16_Archaea_50_20_curated
rps10p; 30S ribosomal protein S10
13_1_40cm_3_scaffold_209_8
RBG_16_Archaea_50_20_curated, Archaea

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comp(6576..7838)
DNA (1263bp) protein (421aa)
Elongation factor 1-alpha n=1 Tax=uncultured archaeon RepID=G3C993_9ARCH
tuf; elongation factor 1-alpha Tax=RBG_16_Archaea_50_20_curated
translation elongation factor EF-1 alpha
13_1_40cm_3_scaffold_209_9
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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8024..9313
DNA (1290bp) protein (430aa)
gdhA; glutamate dehydrogenase (EC:1.4.1.3) Tax=RBG_16_Thaumarchaeota_49_8_curated
gdhA; glutamate dehydrogenase (EC:1.4.1.3)
Glu/Leu/Phe/Val dehydrogenase, C terminal n=1 Tax=uncultured organism RepID=M1Q2T1_9ZZZZ
13_1_40cm_3_scaffold_209_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(9331..9801)
DNA (471bp) protein (157aa)
ferritin; K03594 bacterioferritin id=14424664 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
ferritin; K03594 bacterioferritin Tax=CSP1_2_Dadabacteria
hypothetical protein
13_1_40cm_3_scaffold_209_11
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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9870..10763
DNA (894bp) protein (298aa)
putative (S)-2,3-Di-O-farnesylgeranylglyceryl synthase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=RBG_13_Bathyarchaeota_38_9_curated
4-hydroxybenzoate octaprenyltransferase (EC:2.5.1.-)
hypothetical protein n=2 Tax=unclassified candidate division pSL4 RepID=UPI000382AB40
13_1_40cm_3_scaffold_209_12
RBG_16_Archaea_50_20_curated, Archaea

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comp(10719..12038)
DNA (1320bp) protein (440aa)
hmgA-1; hydroxymethylglutaryl-CoA reductase, degradative (EC:1.1.1.34 1.1.1.88); K00054 hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] Tax=RBG_16_Archaea_50_20_curated
3-hydroxy-3-methylglutaryl-CoA reductase (EC:1.1.1.34)
3-hydroxy-3-methylglutaryl-CoA reductase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5L6_9ARCH
13_1_40cm_3_scaffold_209_13
CG_CPArch01-01, CG_CPArch01, Archaea

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comp(12041..12574)
DNA (534bp) protein (178aa)
isopentenyl-diphosphate delta-isomerase; K01823 isopentenyl-diphosphate delta-isomerase [EC:5.3.3.2] Tax=CG_CPArch01-01
Isopentenyl-diphosphate delta-isomerase, type 1 n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R784_OWEHD
isopentenyl-diphosphate delta-isomerase
13_1_40cm_3_scaffold_209_14
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(12641..13633)
DNA (993bp) protein (331aa)
Mevalonate kinase (EC:2.7.1.36)
Mevalonate kinase n=1 Tax=Thermofilum sp. 1910b RepID=S5ZEG6_9CREN
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_3_scaffold_209_15
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(13630..14478)
DNA (849bp) protein (283aa)
MEMO1 family protein MK0963 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Y963_METKA
dioxygenase; K06990 Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_3_scaffold_209_16
RBG_16_Archaea_50_20_curated, Archaea

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comp(14475..15152)
DNA (678bp) protein (226aa)
30S ribosomal protein S2 n=1 Tax=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) RepID=RS2_SULTO
rps2P; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RBG_16_Archaea_50_20_curated
rps2P; 30S ribosomal protein S2
13_1_40cm_3_scaffold_209_17
RBG_16_Archaea_50_20_curated, Archaea

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comp(15166..15390)
DNA (225bp) protein (75aa)
DNA-directed RNA polymerase subunit N n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B761_ACIHW
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
RNA polymerase subunit N
13_1_40cm_3_scaffold_209_18
RBG_16_Archaea_50_20_curated, Archaea

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comp(15403..15675)
DNA (273bp) protein (91aa)
30S ribosomal protein S9 n=4 Tax=Methanobrevibacter RepID=A5UN58_METS3
rps9p; ribosomal protein S9P Rps9p; K02996 small subunit ribosomal protein S9 Tax=RBG_16_Archaea_50_20_curated
rps9p; 30S ribosomal protein S9P
13_1_40cm_3_scaffold_209_19
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(15810..16271)
DNA (462bp) protein (154aa)
50S ribosomal protein L13 n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=RL13_THEKO
50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus
13_1_40cm_3_scaffold_209_20
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(16268..16903)
DNA (636bp) protein (212aa)
DNA-directed RNA polymerase subunit D (EC:2.7.7.6); K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=RBG_16_Bathyarchaeota_48_13_curated
DNA-directed RNA polymerase subunit D (EC:2.7.7.6)
DNA-directed RNA polymerase subunit D n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N510_9ARCH
13_1_40cm_3_scaffold_209_21
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(17199..17765)
DNA (567bp) protein (189aa)
Bifunctional deaminase-reductase-like protein n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0MV56_9EURY
Bifunctional deaminase-reductase-like protein {ECO:0000313|EMBL:EQB65250.1}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermopla
hypothetical protein
13_1_40cm_3_scaffold_209_22
unknown

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comp(17889..18428)
DNA (540bp) protein (180aa)

This feature has no annotations

13_1_40cm_3_scaffold_209_23
RBG_16_Archaea_50_20_curated, Archaea

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comp(18477..19166)
DNA (690bp) protein (230aa)
30S ribosomal protein S4 n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=RS4_THESM
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_16_Archaea_50_20_curated
rps4p; 30S ribosomal protein S4
13_1_40cm_3_scaffold_209_24
RBG_16_Archaea_50_20_curated, Archaea

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comp(19170..19670)
DNA (501bp) protein (167aa)
30S ribosomal protein S13 n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5D4_9ARCH
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RBG_16_Archaea_50_20_curated
small subunit ribosomal protein S13
13_1_40cm_3_scaffold_209_25
CG_Micra_05, Micraarchaeota, Archaea

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20023..20445
DNA (423bp) protein (141aa)
S-adenosylmethionine decarboxylase proenzyme; K01611 S-adenosylmethionine decarboxylase [EC:4.1.1.50] Tax=CG_Micra_05
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E0V2_DICTD
S-adenosylmethionine decarboxylase
13_1_40cm_3_scaffold_209_26
RBG_16_Archaea_50_20_curated, Archaea

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20565..20861
DNA (297bp) protein (99aa)
50S ribosomal protein L14e n=1 Tax=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) RepID=RL14E_SULIM
50S ribosomal protein L14e; K02875 large subunit ribosomal protein L14e Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L14e
13_1_40cm_3_scaffold_209_27
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

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21231..22019
DNA (789bp) protein (263aa)
Probable tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01081}; Short=Psi5
Probable tRNA pseudouridine synthase B n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=TRUB_METKA
TruB; H/ACA RNA-protein complex component Cbf5p
13_1_40cm_3_scaffold_209_28
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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comp(22175..23020)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00035E799E
peptidase M50 Tax=RBG_13_Bathyarchaeota_52_12_curated
peptidase M50
13_1_40cm_3_scaffold_209_29
unknown

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23546..23884
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_3_scaffold_209_30
unknown

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24198..24731
DNA (534bp) protein (178aa)

This feature has no annotations

Displaying items 1-30 of 55 in total

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