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13_1_40cm_3_scaffold_2174

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2174_1
RBG_16_Archaea_50_20_curated, Archaea

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comp(28..903)
DNA (876bp) protein (292aa)
50S ribosomal protein L10 n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EEN6_PYRF1
rpl10p; acidic ribosomal protein P0 Tax=RBG_16_Archaea_50_20_curated
rpl10p; acidic ribosomal protein P0 (L10p)
13_1_40cm_3_scaffold_2174_2
RBG_16_Archaea_50_20_curated, Archaea

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comp(908..1570)
DNA (663bp) protein (221aa)
50S ribosomal protein L1 n=1 Tax=Methanobacterium sp. MB1 RepID=U6EC15_9EURY
50S ribosomal protein L1 Tax=RBG_16_Archaea_50_20_curated
rpl1p; 50S ribosomal protein L1P
13_1_40cm_3_scaffold_2174_3
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(1583..1927)
DNA (345bp) protein (115aa)
50S ribosomal protein L11 n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8ALD2_METOI
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RBG_13_Bathyarchaeota_38_9_curated
50S ribosomal protein L11
13_1_40cm_3_scaffold_2174_4
RBG_16_Archaea_50_20_curated, Archaea

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comp(2052..2471)
DNA (420bp) protein (140aa)
Transcription elongation factor Spt5 n=2 Tax=Pyrococcus furiosus RepID=SPT5_PYRFU
nusG; transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG Tax=RBG_16_Archaea_50_20_curated
nusG; transcription antitermination protein NusG
13_1_40cm_3_scaffold_2174_5
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2896..3585)
DNA (690bp) protein (230aa)
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=370438 species="Bacte
Ornithine carbamoyltransferase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D509_PELTS
ArgF; ornithine carbamoyltransferase
13_1_40cm_3_scaffold_2174_6
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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3962..4231
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4I4_9ARCH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ47203.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum
13_1_40cm_3_scaffold_2174_7
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(4292..5197)
DNA (906bp) protein (302aa)
Signal recognition particle receptor FtsY n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YUP3_THEON
FtsY-like signal recognition particle receptor protein subunit alpha; K03110 fused signal recognition particle receptor Tax=RBG_13_Bathyarchaeota_38_9_curated
signal recognition particle GTPase
13_1_40cm_3_scaffold_2174_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(5190..5660)
DNA (471bp) protein (157aa)
Prefoldin subunit alpha n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=PFDA_METKA
GIM5; prefoldin subunit alpha; K04797 prefoldin alpha subunit Tax=RBG_13_Bathyarchaeota_38_9_curated
GIM5; prefoldin subunit alpha
13_1_40cm_3_scaffold_2174_9
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(5916..6581)
DNA (666bp) protein (222aa)
Putative translation initiation factor eIF-6 n=1 Tax=uncultured Acidilobus sp. MG RepID=V4LV87_9CREN
translation initiation factor 6 Tax=RBG_13_Bathyarchaeota_38_9_curated
translation initiation factor IF-6
13_1_40cm_3_scaffold_2174_10
unknown

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comp(6733..6987)
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_40cm_3_scaffold_2174_11
RBG_16_Archaea_50_20_curated, Archaea

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comp(7149..7493)
DNA (345bp) protein (115aa)
DNA-binding protein Mhar_1733 n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WQU8_METH6
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_3_scaffold_2174_12
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8031..8333)
DNA (303bp) protein (101aa)
Ribonuclease P protein component 4 {ECO:0000256|HAMAP-Rule:MF_00757}; Short=RNase P component 4 {ECO:0000256|HAMAP-Rule:MF_00757};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00757};; Rpp21 {ECO:0000256|H
UPI0003D1A2D4 related cluster n=1 Tax=unknown RepID=UPI0003D1A2D4
ribonuclease P protein component 4
13_1_40cm_3_scaffold_2174_13
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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8394..9119
DNA (726bp) protein (242aa)
16S rRNA methyltransferase n=1 Tax=Thermococcus zilligii RepID=UPI000299E84C
ribosome biogenesis protein; K14568 essential for mitotic growth 1 Tax=RBG_13_Bathyarchaeota_38_9_curated
ribosome biogenesis protein
13_1_40cm_3_scaffold_2174_14
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

9157..9543
DNA (387bp) protein (129aa)
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_2174_15
unknown

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9670..10287
DNA (618bp) protein (206aa)

This feature has no annotations

13_1_40cm_3_scaffold_2174_16
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(10284..11285)
DNA (1002bp) protein (334aa)
putative aminomethyltransferase (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] id=14425044 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin1_lowGC organism_group=Unknown_CP
putative aminomethyltransferase (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] Tax=CSP1_2_Dadabacteria
glycine cleavage system t protein (EC:2.1.2.10)
13_1_40cm_3_scaffold_2174_17
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11325..11837)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI000367F08C
Uncharacterized protein {ECO:0000313|EMBL:KFA92879.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
13_1_40cm_3_scaffold_2174_18
Thermoplasmatales archaeon A-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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12172..12978
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon A-plasma RepID=T0N732_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB71126.1}; TaxID=667135 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon A-pl
13_1_40cm_3_scaffold_2174_19

Not on your lists

13275..14129
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RDH1_ARCPA
Marine sediment metagenome DNA, contig: S03H2_L06909 {ECO:0000313|EMBL:GAH35488.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_1_40cm_3_scaffold_2174_20
unknown

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14155..15036
DNA (882bp) protein (294aa)

This feature has no annotations

13_1_40cm_3_scaffold_2174_21
unknown

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15037..16095
DNA (1059bp) protein (353aa)

This feature has no annotations

13_1_40cm_3_scaffold_2174_22
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16092..16577
DNA (486bp) protein (162aa)
Flagella cluster protein ( integral membrane protein) n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPS0_9EURY
Flagella cluster protein ( integral membrane protein) {ECO:0000313|EMBL:EFW93523.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" sour
hypothetical protein
13_1_40cm_3_scaffold_2174_23
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16605..17078
DNA (474bp) protein (158aa)
Ribonuclease HI n=1 Tax=halophilic archaeon J07HX5 RepID=U1MFL7_9EURY
Ribonuclease HI {ECO:0000313|EMBL:ERG87924.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
ribonuclease H
13_1_40cm_3_scaffold_2174_24
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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17414..18109
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG08_NITGG
hypothetical protein
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_3_scaffold_2174_25
unknown

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comp(18152..18379)
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_3_scaffold_2174_26
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(18446..19216)
DNA (771bp) protein (257aa)
Putative reductase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AM59_IGNAJ
reductase
Putative reductase {ECO:0000313|EMBL:AFH50066.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium alb
Displaying 26 items

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