ggKbase home page

13_1_40cm_3_scaffold_2995

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2995_1
unknown

Not on your lists

2..370
DNA (369bp) protein (123aa)

This feature has no annotations

13_1_40cm_3_scaffold_2995_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(915..1835)
DNA (921bp) protein (307aa)
thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Thioredoxin reductase id=1823931 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
thioredoxin reductase
13_1_40cm_3_scaffold_2995_3
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

1947..2600
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N446_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_3_scaffold_2995_4
Komagataeibacter xylinus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2880..3440
DNA (561bp) protein (187aa)
Thiosulfate sulfurtransferase n=1 Tax=Gluconacetobacter xylinus (strain NBRC 3288 / BCRC 11682 / LMG 1693) RepID=G2I4T2_GLUXN
thiosulfate sulfurtransferase
Thiosulfate sulfurtransferase {ECO:0000313|EMBL:AHI25797.1}; TaxID=1296990 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komag
13_1_40cm_3_scaffold_2995_5
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(3437..4666)
DNA (1230bp) protein (410aa)
Hypothetical conserved protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3B4_9ARCH
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_40cm_3_scaffold_2995_6
unknown

Not on your lists

4738..6063
DNA (1326bp) protein (442aa)

This feature has no annotations

13_1_40cm_3_scaffold_2995_7
unknown

Not on your lists

comp(6159..6548)
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_40cm_3_scaffold_2995_8
unknown

Not on your lists

comp(6797..7351)
DNA (555bp) protein (185aa)

This feature has no annotations

13_1_40cm_3_scaffold_2995_9
unknown

Not on your lists

7407..7733
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_40cm_3_scaffold_2995_10

Not on your lists

comp(7856..8788)
DNA (933bp) protein (311aa)
hypothetical protein
Marine sediment metagenome DNA, contig: S06H3_C00452 {ECO:0000313|EMBL:GAH98607.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
13_1_40cm_3_scaffold_2995_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

8919..9812
DNA (894bp) protein (298aa)
Hypothetical conserved protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3B3_9ARCH
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
13_1_40cm_3_scaffold_2995_12
Clostridium sp. CAG:273, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9958..10725)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:273 RepID=R7L878_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE84805.1}; TaxID=1262789 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
ATPase
13_1_40cm_3_scaffold_2995_13
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

10913..11656
DNA (744bp) protein (248aa)
Uracil-DNA glycosylase n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DVE5_METI4
Uracil-DNA glycosylase
Uracil-DNA glycosylase {ECO:0000313|EMBL:ACD83298.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" sou
13_1_40cm_3_scaffold_2995_14
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(11705..12958)
DNA (1254bp) protein (418aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_2995_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(12984..14291)
DNA (1308bp) protein (436aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_3_scaffold_2995_16
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

14743..15330
DNA (588bp) protein (196aa)
hypothetical protein; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=CG_PER_01
putative carbamoyl phosphate synthase large subunit, partial n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25C3
hypothetical protein
13_1_40cm_3_scaffold_2995_17
unknown

Not on your lists

comp(15761..16027)
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_3_scaffold_2995_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(16024..17043)
DNA (1020bp) protein (340aa)
glycosyltransferase, group 4 family (EC:2.7.8.-)
Putative glycosyl transferase, family 4 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDG1_NITGG
glycosyl transferase Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_3_scaffold_2995_19
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

17213..18469
DNA (1257bp) protein (419aa)
glycine dehydrogenase subunit 1 (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] Tax=RBG_16_Bathyarchaeota_48_13_curated
Glycine dehydrogenase (Decarboxylating) alpha subunit n=1 Tax=Desulfurococcus mucosus (strain ATCC 35584 / DSM 2162 / JCM 9187 / O7/1) RepID=E8R910_DESM0
glycine dehydrogenase subunit alpha
13_1_40cm_3_scaffold_2995_20
Pyrococcus sp. ST04, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

18474..18851
DNA (378bp) protein (126aa)
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00713};; Glycine cleavage system P-protein subunit 2 {ECO:0000256|HA
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=1 Tax=Pyrococcus sp. ST04 RepID=I3RBP7_9EURY
glycine dehydrogenase subunit 2
13_1_40cm_3_scaffold_2995_21
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

18848..19960
DNA (1113bp) protein (371aa)
glycine dehydrogenase subunit 2; K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2] Tax=RBG_16_Archaea_50_20_curated
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZMA3_THELI
13_1_40cm_3_scaffold_2995_22
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

20181..21245
DNA (1065bp) protein (355aa)
Cell division protein FtsZ n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GK04_METTF
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RBG_16_Bathyarchaeota_48_13_curated
cell division protein FtsZ
13_1_40cm_3_scaffold_2995_23
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(21242..21877)
DNA (636bp) protein (212aa)
PHP domain protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GW18_METFV
php domain protein; K07053 Tax=RBG_16_Archaea_50_20_curated
php domain-containing protein
13_1_40cm_3_scaffold_2995_24
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


comp(21861..23558)
DNA (1698bp) protein (566aa)
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RBG_16_Archaea_50_20_curated
Methionine--tRNA ligase n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EE63_PYRF1
methionyl-tRNA synthetase
Displaying 24 items

View Taxonomy