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13_1_40cm_3_scaffold_5050

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_5050_1
unknown

Not on your lists

3..197
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_3_scaffold_5050_trna_1
unknown

Not on your lists

138..235
DNA (98bp)
transferRNA
13_1_40cm_3_scaffold_5050_2
unknown

Not on your lists

comp(217..561)
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_40cm_3_scaffold_5050_3
unknown

Not on your lists

784..1014
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_40cm_3_scaffold_5050_4
unknown

Not on your lists

comp(1251..1937)
DNA (687bp) protein (229aa)

This feature has no annotations

13_1_40cm_3_scaffold_5050_5
unknown

Not on your lists

comp(1963..2088)
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_3_scaffold_5050_6
unknown

Not on your lists

comp(2645..2962)
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_40cm_3_scaffold_5050_7
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

3056..4768
DNA (1713bp) protein (571aa)
Gll2457 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NHS8_GLOVI
hypothetical protein
Gll2457 protein {ECO:0000313|EMBL:BAC90398.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
13_1_40cm_3_scaffold_5050_8
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5206..6123)
DNA (918bp) protein (306aa)
DNA polymerase LigD, polymerase domain protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CIP8_DESK7
DNA polymerase LigD, polymerase domain-containing protein
DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:AEG14580.1}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfo
13_1_40cm_3_scaffold_5050_9
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

6227..6958
DNA (732bp) protein (244aa)
Probable DNA repair protein Arcve_0208 n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KNL7_ARCVS
DNA repair protein
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeo
13_1_40cm_3_scaffold_5050_10
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

6955..7920
DNA (966bp) protein (322aa)
DNA ligase, putative n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28549_ARCFU
DNA ligase
DNA ligase, putative {ECO:0000313|EMBL:AAB89526.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus (stra
13_1_40cm_3_scaffold_5050_11
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

9086..9346
DNA (261bp) protein (87aa)
Elongation factor 1-beta n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=EF1B_STAMF
ef1B; elongation factor 1-beta; K03232 elongation factor 1-beta Tax=RBG_16_Bathyarchaeota_48_13_curated
ef1B; elongation factor 1-beta
13_1_40cm_3_scaffold_5050_12
unknown

Not on your lists

9559..9816
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_3_scaffold_5050_13
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

9909..12089
DNA (2181bp) protein (727aa)
AAA family ATPase, CDC48 subfamily n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TTA3_9ARCH
ATPase AAA Tax=RBG_16_Archaea_50_20_curated
Cell division protein FtsH
13_1_40cm_3_scaffold_5050_14
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

12156..12359
DNA (204bp) protein (68aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_3_scaffold_5050_15
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12408..12740
DNA (333bp) protein (111aa)
Thioredoxin n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMW2_METH6
Thioredoxin
Thioredoxin {ECO:0000313|EMBL:AET64527.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strai
13_1_40cm_3_scaffold_5050_16
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

12857..13915
DNA (1059bp) protein (353aa)
Phosphate regulatory protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N322_9ARCH
phosphate regulatory protein Tax=RBG_16_Thaumarchaeota_49_8_curated
phosphate regulatory protein
13_1_40cm_3_scaffold_5050_17
unknown

Not on your lists

comp(14529..15050)
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_40cm_3_scaffold_5050_18
unknown

Not on your lists

comp(15214..15741)
DNA (528bp) protein (176aa)

This feature has no annotations

13_1_40cm_3_scaffold_5050_19
Methanofollis liminatans, Methanofollis, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16253..17554
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J1AN51_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJG06273.1}; TaxID=28892 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanofollis.;" source="Methanofollis lim
hypothetical protein
13_1_40cm_3_scaffold_5050_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

17558..18382
DNA (825bp) protein (275aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_3_scaffold_5050_21
Streptomyces katrae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19460..19894
DNA (435bp) protein (145aa)
Possible lyase n=1 Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2RBQ1_STRVP
possible lyase
Glyoxalase {ECO:0000313|EMBL:KJY28046.1}; TaxID=68223 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces katrae.;"
13_1_40cm_3_scaffold_5050_22
unknown

Not on your lists

20058..20381
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_40cm_3_scaffold_5050_23
unknown

Not on your lists

20466..20813
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_3_scaffold_5050_24
unknown

Not on your lists

20987..21565
DNA (579bp) protein (193aa)

This feature has no annotations

13_1_40cm_3_scaffold_5050_25
unknown

Not on your lists

21657..22223
DNA (567bp) protein (189aa)

This feature has no annotations

13_1_40cm_3_scaffold_5050_26
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

22345..22707
DNA (363bp) protein (121aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_5050_27
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

22647..23960
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q467S0_METBF
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_5050_28
unknown

Not on your lists

24200..24460
DNA (261bp) protein (87aa)

This feature has no annotations

Displaying 29 items

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