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13_1_40cm_3_scaffold_536

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_536_1
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3..914
DNA (912bp) protein (304aa)
Cation efflux family protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q091Y8_STIAD
cation diffusion facilitator family transporter Tax=RBG_16_Deltaproteobacteria_54_11_curated
cation efflux family protein
13_1_40cm_3_scaffold_536_2

Not on your lists

comp(940..1728)
DNA (789bp) protein (263aa)
Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=mine drainage metagenome RepID=T0ZPH6_9ZZZZ
Carboxyvinyl-carboxyphosphonate phosphorylmutase {ECO:0000313|EMBL:EQD46427.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PEP phosphonomutase-like protein
13_1_40cm_3_scaffold_536_3
uncultured Acetothermia bacterium, Acetothermia, Bacteria

Not on your lists

comp(1818..2762)
DNA (945bp) protein (315aa)
Periplasmic binding protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SLS3_9BACT
Periplasmic solute binding protein {ECO:0000313|EMBL:BAL55796.1}; TaxID=236499 species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
periplasmic binding protein
13_1_40cm_3_scaffold_536_4
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

2895..3446
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI000381FE34
hypothetical protein Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_3_scaffold_536_5
unknown

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3436..3969
DNA (534bp) protein (178aa)

This feature has no annotations

13_1_40cm_3_scaffold_536_6
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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comp(3973..5598)
DNA (1626bp) protein (542aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RBG_16_KB1_OP1_55_9_curated
hyuB; N-methylhydantoinase (ATP-hydrolyzing) B (EC:3.5.2.14); K01474 N-methylhydantoinase B [EC:3.5.2.14] id=24634356 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
5-oxoprolinase (EC:3.5.2.9)
13_1_40cm_3_scaffold_536_7
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5669..7072
DNA (1404bp) protein (468aa)
Glycoside hydrolase family protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IUL7_9EURY
Glycoside hydrolase family protein {ECO:0000313|EMBL:ESP86882.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candid
PKD domain containing protein
13_1_40cm_3_scaffold_536_8
unknown

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comp(7480..7917)
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_40cm_3_scaffold_536_9
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(8072..10150)
DNA (2079bp) protein (693aa)
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:AEF96043.1}; EC=3.5.2.9 {ECO:0000313|EMBL:AEF96043.1};; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococc
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BBN4_METIK
5-oxoprolinase
13_1_40cm_3_scaffold_536_10
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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10289..11440
DNA (1152bp) protein (384aa)
Exonuclease SbcCD, D subunit n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N6X0_9ARCH
exonuclease SbcCD, D subunit
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:BAJ48039.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum sub
13_1_40cm_3_scaffold_536_11
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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11530..13629
DNA (2100bp) protein (700aa)
Exonuclease SbcCD, C subunit n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N6X1_9ARCH
exonuclease SbcCD, C subunit
Exonuclease SbcCD, C subunit {ECO:0000313|EMBL:BAJ48040.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum sub
13_1_40cm_3_scaffold_536_12
unknown

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comp(13761..14147)
DNA (387bp) protein (129aa)

This feature has no annotations

13_1_40cm_3_scaffold_536_13

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14289..15290
DNA (1002bp) protein (334aa)
Diphthamide synthase, subunit DPH2 n=3 Tax=Methanobrevibacter smithii RepID=A5UMY5_METS3 id=5103039 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Diphthamide synthase, subunit DPH2
Diphthamide synthase, subunit DPH2 {ECO:0000313|EMBL:AJF62320.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
13_1_40cm_3_scaffold_536_14
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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15291..15905
DNA (615bp) protein (205aa)
Putative methyltransferase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYQ4_METPS
ribosomal L11 methyltransferase; K07579 putative methylase Tax=RBG_16_Bathyarchaeota_48_13_curated
putative methyltransferase
13_1_40cm_3_scaffold_536_15
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

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comp(15902..19366)
DNA (3465bp) protein (1155aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037B1389
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
hypothetical protein
13_1_40cm_3_scaffold_536_16
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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19521..20348
DNA (828bp) protein (276aa)
Putative amidohydrolase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TC05_9EURY
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Tax=RBG_13_Bathyarchaeota_46_16b_curated
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
13_1_40cm_3_scaffold_536_17
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


21043..21516
DNA (474bp) protein (158aa)
50S ribosomal protein L16 n=1 Tax=Methanothermococcus thermolithotrophicus RepID=UPI000367F825
rpl10e; 50S ribosomal protein L10e; K02866 large subunit ribosomal protein L10e Tax=RBG_16_Archaea_50_20_curated
rpl10e; 50S ribosomal protein L10e
13_1_40cm_3_scaffold_536_18
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

21521..23908
DNA (2388bp) protein (796aa)
phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RBG_13_Nitrospirae_39_12_curated
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RXR3_THEPD
13_1_40cm_3_scaffold_536_19
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

23929..24354
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YUR5_METPS
hypothetical protein
UPF0146 protein MCP_0115 {ECO:0000256|HAMAP-Rule:MF_00341}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella palud
13_1_40cm_3_scaffold_536_20

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24457..25539
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1A5P8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD55976.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_1_40cm_3_scaffold_536_21
unknown

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25696..25998
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_3_scaffold_536_22
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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26011..27273
DNA (1263bp) protein (421aa)
coaBC; coenzyme A biosynthesis bifunctional protein coaBC (EC:4.1.1.36 6.3.2.5)
Coenzyme A biosynthesis bifunctional protein coaBC n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE45_NITGG
phosphopantothenoylcysteine decarboxylase Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_3_scaffold_536_23
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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27320..28072
DNA (753bp) protein (251aa)
Hydrolase, carbon-nitrogen family n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D316_9ARCH
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Tax=RBG_13_Bathyarchaeota_38_9_curated
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
13_1_40cm_3_scaffold_536_24
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

28193..28807
DNA (615bp) protein (205aa)
2-haloacid dehalogenase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N6C7_9ARCH
2-haloacid dehalogenase
2-haloacid dehalogenase {ECO:0000313|EMBL:BAJ47846.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterra
13_1_40cm_3_scaffold_536_25
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(28773..29582)
DNA (810bp) protein (270aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ar
DNA methylase N-4/N-6 domain protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KNP6_ARCVS
DNA methylase N-4/N-6 domain-containing protein
13_1_40cm_3_scaffold_536_26
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(29590..30333)
DNA (744bp) protein (248aa)
Putative 3-isopropylmalate dehydratase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INE0_NITGG
3-isopropylmalate dehydratase Tax=RBG_16_Thaumarchaeota_49_8_curated
3-isopropylmalate dehydratase
13_1_40cm_3_scaffold_536_27
unknown

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30513..30758
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_3_scaffold_536_28
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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31445..31891
DNA (447bp) protein (149aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y567_THEBD
ribosomal-protein-alanine acetyltransferase
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:ADG87342.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora
13_1_40cm_3_scaffold_536_29
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31913..32329)
DNA (417bp) protein (139aa)
virulence protein n=1 Tax=Methylobacter marinus RepID=UPI000382C4CE
gloA3; lactoylglutathione lyase Tax=RBG_13_Deltaproteobacteria_43_22_curated
hypothetical protein
13_1_40cm_3_scaffold_536_30
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(32420..32980)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DGD5_9BURK
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
glyoxalase/bleomycin resistance protein/dioxygenase
Displaying items 1-30 of 40 in total

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