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13_1_40cm_3_scaffold_1680

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1680_1
unknown

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3..782
DNA (780bp) protein (260aa)

This feature has no annotations

13_1_40cm_3_scaffold_1680_2
RBG_16_Archaea_50_20_curated, Archaea

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comp(792..1169)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon W5-61a RepID=H9BX82_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_3_scaffold_1680_3
unknown

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comp(1221..1484)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_3_scaffold_1680_4
unknown

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comp(1643..2137)
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_40cm_3_scaffold_1680_5
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(2705..4024)
DNA (1320bp) protein (440aa)
malate synthase (EC:2.3.3.9)
Malate synthase {ECO:0000313|EMBL:BAJ48220.1}; EC=2.3.3.9 {ECO:0000313|EMBL:BAJ48220.1};; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source
Malate synthase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N7F1_9ARCH
13_1_40cm_3_scaffold_1680_6
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3994..4269)
DNA (276bp) protein (92aa)
malate synthase (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9] Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
malate synthase (EC:2.3.3.9)
Malate synthase n=1 Tax=Clostridium ultunense Esp RepID=M1Z5R4_9CLOT
13_1_40cm_3_scaffold_1680_7
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(4289..5605)
DNA (1317bp) protein (439aa)
isocitrate lyase (EC:4.1.3.1)
Isocitrate lyase {ECO:0000313|EMBL:ABG05008.1}; EC=4.1.3.1 {ECO:0000313|EMBL:ABG05008.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacter
Isocitrate lyase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUC0_RUBXD
13_1_40cm_3_scaffold_1680_8
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5800..7080)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJG3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84377.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_40cm_3_scaffold_1680_9
RBG_16_Archaea_50_20_curated, Archaea

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comp(7181..7483)
DNA (303bp) protein (101aa)
Translation initiation factor 1A n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4C5_9ARCH
translation initiation factor IF-1 Tax=RBG_16_Archaea_50_20_curated
translation initiation factor eIF-1A
13_1_40cm_3_scaffold_1680_10
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(7558..8082)
DNA (525bp) protein (175aa)
Thiol-disulfide isomerase or thioredoxin n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZNT6_MELRP
thiol-disulfide isomerase or thioredoxin Tax=RBG_16_Archaea_50_20_curated
thioredoxin-like protein
13_1_40cm_3_scaffold_1680_11
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8195..8908
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M7A9_GEODF
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
13_1_40cm_3_scaffold_1680_12
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(8929..9843)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon JGI 0000001-H6 RepID=UPI000375EB43
peroxiredoxin Tax=RBG_16_Archaea_50_20_curated
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
13_1_40cm_3_scaffold_1680_13
unknown

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9930..10166
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_3_scaffold_1680_14
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(10463..11746)
DNA (1284bp) protein (428aa)
Putative arsenical pump membrane protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHT6_NITGG
arsB; arsenical pump membrane protein Tax=RBG_16_Thaumarchaeota_49_8_curated
Na+/H+ antiporter NhaD-like permease
13_1_40cm_3_scaffold_1680_15
unknown

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comp(11832..12224)
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_40cm_3_scaffold_1680_16
unknown

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comp(12785..13099)
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_3_scaffold_1680_17
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(13208..13735)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3) RepID=D7ANY9_THEM3
hypothetical protein Tax=RBG_16_Bathyarchaeota_57_9_curated
hypothetical protein
13_1_40cm_3_scaffold_1680_18
unknown

Not on your lists

13917..14234
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_40cm_3_scaffold_1680_19
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(14293..15453)
DNA (1161bp) protein (387aa)
thrC; threonine synthase (EC:4.2.3.1)
Threonine synthase {ECO:0000313|EMBL:BAJ64016.1}; EC=4.2.3.1 {ECO:0000313|EMBL:BAJ64016.1};; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;"
Threonine synthase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N6F2_ANATU
13_1_40cm_3_scaffold_1680_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

15531..15878
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Pyrococcus furiosus RepID=Q8U0V5_PYRFU
PadR family transcriptional regulator Tax=RBG_13_Bathyarchaeota_38_9_curated
transcriptional regulator, PadR-like family
13_1_40cm_3_scaffold_1680_21
unknown

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comp(15885..16208)
DNA (324bp) protein (108aa)

This feature has no annotations

Displaying 21 items

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