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13_1_40cm_3_scaffold_1679

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1679_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(117..611)
DNA (495bp) protein (165aa)
Nudix 7..137 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Nudix 7..137 id=1247471 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
13_1_40cm_3_scaffold_1679_2
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

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720..1337
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Leptospira inadai serovar Lyme str. 10 RepID=V6HAN0_9LEPT
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
hypothetical protein
13_1_40cm_3_scaffold_1679_trna_1
unknown

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comp(1393..1476)
DNA (84bp)
transferRNA
13_1_40cm_3_scaffold_1679_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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1519..1725
DNA (207bp) protein (69aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_1679_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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1722..2339
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI00037229EA
Phosphoglycerate mutase family protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_1679_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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2369..3691
DNA (1323bp) protein (441aa)
Glycine dehydrogenase (decarboxylating) (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] Tax=RBG_16_Euryarchaeota_68_12_curated
Glycine dehydrogenase (decarboxylating) (EC:1.4.4.2)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003641DBA rbh
13_1_40cm_3_scaffold_1679_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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3688..5163
DNA (1476bp) protein (492aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2] Tax=RBG_16_Euryarchaeota_68_12_curated
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003823144
13_1_40cm_3_scaffold_1679_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(5183..5830)
DNA (648bp) protein (216aa)
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZD2_METBU
hypothetical protein; K07142 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_3_scaffold_1679_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(5847..6959)
DNA (1113bp) protein (371aa)
Putative membrane protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMW3_ACIS0
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_1679_9
unknown

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7050..7865
DNA (816bp) protein (272aa)

This feature has no annotations

13_1_40cm_3_scaffold_1679_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(7872..8516)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000374FB15
putative translation initiation factor eIF-6 Tax=RBG_16_Euryarchaeota_68_12_curated
translation initiation factor IF-6
13_1_40cm_3_scaffold_1679_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(8538..8810)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003601E0A
ribosomal protein L31e Tax=RBG_16_Euryarchaeota_68_12_curated
50S ribosomal protein L31e
13_1_40cm_3_scaffold_1679_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(8815..8970)
DNA (156bp) protein (52aa)
50S ribosomal protein L39e n=1 Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=RL39_THEVO
rpl39e; 50S ribosomal protein L39e; K02924 large subunit ribosomal protein L39e Tax=RBG_16_Euryarchaeota_68_12_curated
rpl39e; 50S ribosomal protein L39
13_1_40cm_3_scaffold_1679_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(8975..9310)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003714F93
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
DNA-binding protein
13_1_40cm_3_scaffold_1679_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(9310..9774)
DNA (465bp) protein (155aa)
30S ribosomal protein S19e n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HKS5_ACIS0
ribosomal protein S19E (S16A) Tax=RBG_16_Euryarchaeota_68_12_curated
ribosomal protein S19E (S16A)
13_1_40cm_3_scaffold_1679_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

9886..10413
DNA (528bp) protein (176aa)
aromatic acid decarboxylase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-] Tax=RBG_16_Euryarchaeota_68_12_curated
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=Q97BJ5_THEVO
aromatic acid decarboxylase
Displaying 16 items

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