ggKbase home page

13_1_40cm_3_scaffold_3813

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3813_1
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

2..790
DNA (789bp) protein (263aa)
Methyltransferase type 12 n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WYP7_ACISM
methyltransferase type 12
Methyltransferase type 12 {ECO:0000313|EMBL:ADW67645.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain AT
13_1_40cm_3_scaffold_3813_2
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(787..1494)
DNA (708bp) protein (236aa)
Glycosyl transferase family 2 n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UH91_CELFN
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADG73294.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain AT
13_1_40cm_3_scaffold_3813_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(1481..2263)
DNA (783bp) protein (261aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_3813_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2321..3319)
DNA (999bp) protein (333aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_3813_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3323..4414)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UXV2_TERSS
NHL repeat containing protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_3813_6
unknown

Not on your lists

4832..5422
DNA (591bp) protein (197aa)

This feature has no annotations

13_1_40cm_3_scaffold_3813_7
unknown

Not on your lists

5412..5825
DNA (414bp) protein (138aa)

This feature has no annotations

13_1_40cm_3_scaffold_3813_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(5822..6625)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LP14_9EURY
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_3813_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(6683..7774)
DNA (1092bp) protein (364aa)
gcvT1; glycine cleavage system T protein; K00605 aminomethyltransferase [EC:2.1.2.10] Tax=RBG_16_Euryarchaeota_67_27_curated
glycine cleavage system T protein; K00605 aminomethyltransferase [EC:2.1.2.10] id=14429565 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
gcvT1; glycine cleavage system T protein
13_1_40cm_3_scaffold_3813_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

7776..8075
DNA (300bp) protein (100aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_3_scaffold_3813_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(8072..8839)
DNA (768bp) protein (256aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_3813_12
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

8923..9414
DNA (492bp) protein (164aa)
acetyltransferase id=14631200 bin=bin9_gal15 species=Halobacillus sp. BAB-2008 genus=Halobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
acetyltransferase Tax=CSP1_3_Armatimonadetes
sortase-like acyltransferase
13_1_40cm_3_scaffold_3813_13
unknown

Not on your lists

comp(9448..9732)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_3_scaffold_3813_14
unknown

Not on your lists

10203..10742
DNA (540bp) protein (180aa)

This feature has no annotations

13_1_40cm_3_scaffold_3813_15
Tulasnella calospora, Tulasnella, Cantharellales, Agaricomycetes, Basidiomycota, Fungi

Not on your lists

comp(10735..12069)
DNA (1335bp) protein (445aa)
Tetratricopeptide repeat protein n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TT66_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KIO28285.1}; TaxID=1051891 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Cantharellales; Tulasnellaceae; Tulasnella.;" s
hypothetical protein
13_1_40cm_3_scaffold_3813_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

12423..12770
DNA (348bp) protein (116aa)
Small Rab GTPase RabX10 n=1 Tax=Trichomonas vaginalis RepID=Q4G298_TRIVA
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
small GTP-binding protein
13_1_40cm_3_scaffold_3813_17
unknown

Not on your lists

12709..13365
DNA (657bp) protein (219aa)

This feature has no annotations

13_1_40cm_3_scaffold_3813_trna_2
unknown

Not on your lists

comp(12991..13075)
DNA (85bp)
transferRNA
13_1_40cm_3_scaffold_3813_18
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13188..14384)
DNA (1197bp) protein (399aa)
ATP-grasp protein-like protein n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A3J9_NATTJ
Uncharacterized protein {ECO:0000313|EMBL:KJV24710.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojue
ATP-grasp protein-like protein
13_1_40cm_3_scaffold_3813_19
unknown

Not on your lists

14655..15047
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_40cm_3_scaffold_3813_trna_1
unknown

Not on your lists

comp(15091..15174)
DNA (84bp)
transferRNA
13_1_40cm_3_scaffold_3813_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(15218..16831)
DNA (1614bp) protein (538aa)
Phenylalanyl-tRNA synthetase beta chain (EC:6.1.1.20) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003618F81
13_1_40cm_3_scaffold_3813_21
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16883..17521)
DNA (639bp) protein (213aa)
Esterase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGA0_THEM7
esterase
Esterase {ECO:0000313|EMBL:ADU50517.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter mar
13_1_40cm_3_scaffold_3813_22
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(17518..17817)
DNA (300bp) protein (100aa)
Esterase {ECO:0000313|EMBL:KER09924.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
putative esterase id=14632376 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
Displaying 24 items

View Taxonomy