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13_1_40cm_3_scaffold_3837

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3837_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2..2779)
DNA (2778bp) protein (926aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] id=5241347 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
13_1_40cm_3_scaffold_3837_2
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2809..4512)
DNA (1704bp) protein (568aa)
Copper resistance protein C n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KXS7_9ACTO
Copper resistance protein C {ECO:0000313|EMBL:CCH16374.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str.
copper resistance protein CopC
13_1_40cm_3_scaffold_3837_3
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(4509..5129)
DNA (621bp) protein (207aa)
Tax=RBG_16_Chloroflexi_63_12_curated
13_1_40cm_3_scaffold_3837_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(5198..6004)
DNA (807bp) protein (269aa)
ABC-2 type transporter n=1 Tax=Caloramator australicus RC3 RepID=G0V3H3_9CLOT
ABC transporter permease; K09686 antibiotic transport system permease protein Tax=RBG_16_Euryarchaeota_68_12_curated
ABC transporter permease
13_1_40cm_3_scaffold_3837_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(6076..6987)
DNA (912bp) protein (304aa)
Putative ABC transporter permease protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZT3_ANATU
ABC transporter permease; K09686 antibiotic transport system permease protein Tax=RBG_16_Euryarchaeota_67_27_curated
ABC transporter permease
13_1_40cm_3_scaffold_3837_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(6977..8029)
DNA (1053bp) protein (351aa)
Daunorubicin resistance ABC transporter ATPase subunit n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1S017_THEPD
daunorubicin resistance ABC transporter ATPase subunit; K09687 antibiotic transport system ATP-binding protein Tax=RBG_16_Euryarchaeota_68_12_curated
daunorubicin resistance ABC transporter ATPase subunit
13_1_40cm_3_scaffold_3837_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

8135..8755
DNA (621bp) protein (207aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_3837_8
unknown

Not on your lists

comp(8757..9446)
DNA (690bp) protein (230aa)

This feature has no annotations

13_1_40cm_3_scaffold_3837_9
Capsaspora owczarzaki, Capsaspora, Ichthyosporea, Eukaryota

Not on your lists

comp(9458..10240)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B3C8AA
Uncharacterized protein {ECO:0000313|EMBL:KJE91510.1}; TaxID=595528 species="Eukaryota; Ichthyosporea; Capsaspora.;" source="Capsaspora owczarzaki (strain ATCC 30864).;"
13_1_40cm_3_scaffold_3837_10
unknown

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10346..11122
DNA (777bp) protein (259aa)

This feature has no annotations

13_1_40cm_3_scaffold_3837_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(11165..11551)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036320C7
translation initiation factor IF-5A Tax=RBG_16_Euryarchaeota_68_12_curated
translation initiation factor IF-5A
13_1_40cm_3_scaffold_3837_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

11666..12184
DNA (519bp) protein (173aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_3837_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(12191..13261)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035C0B2E
rRNA biogenesis protein Nop5/Nop56 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative NOP5 family protein
13_1_40cm_3_scaffold_3837_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(13571..14572)
DNA (1002bp) protein (334aa)
Putative methylthioribose-1-phosphate isomerase n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0LQG2_9EURY
translation initiation factor IF-2; K03239 translation initiation factor eIF-2B subunit alpha Tax=RBG_16_Euryarchaeota_68_12_curated
translation initiation factor IF-2
13_1_40cm_3_scaffold_3837_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(14622..14855)
DNA (234bp) protein (78aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_3837_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(14852..15091)
DNA (240bp) protein (80aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_3837_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(15151..15456)
DNA (306bp) protein (102aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_3837_18
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

15614..15865
DNA (252bp) protein (84aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_3837_19
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

15949..16455
DNA (507bp) protein (169aa)
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
carbohydrate binding family 6 n=1 Tax=Paenibacillus elgii RepID=UPI000248E048
wcoG; putative cell surface protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_3837_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

16434..18512
DNA (2079bp) protein (693aa)
PKD domain containing protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GYN8_CELFA
wcoG; putative cell surface protein Tax=RBG_16_Euryarchaeota_68_12_curated
PKD domain containing protein
13_1_40cm_3_scaffold_3837_trna_1
unknown

Not on your lists

18547..18619
DNA (73bp)
transferRNA
13_1_40cm_3_scaffold_3837_21

Not on your lists

18760..19479
DNA (720bp) protein (240aa)
Phage Gp37Gp68 family protein n=1 Tax=mine drainage metagenome RepID=T1CQI3_9ZZZZ rbh
Phage Gp37Gp68 family protein {ECO:0000313|EMBL:EQD70764.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Gp37Gp68 family protein
13_1_40cm_3_scaffold_3837_22
unknown

Not on your lists

19469..20470
DNA (1002bp) protein (334aa)

This feature has no annotations

13_1_40cm_3_scaffold_3837_23
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(20547..21527)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037F1580
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
Displaying 24 items

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