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13_1_40cm_scaffold_5743

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_5743_1
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(558..980)
DNA (423bp) protein (141aa)
NUDIX hydrolase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C580_NITHN
translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family Tax=RBG_16_Thaumarchaeota_49_8_curated
NUDIX hydrolase
13_1_40cm_scaffold_5743_2
unknown

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comp(1011..1121)
DNA (111bp) protein (37aa)

This feature has no annotations

13_1_40cm_scaffold_5743_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1118..1936)
DNA (819bp) protein (273aa)
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
Putative D-tyrosyl-tRNA(Tyr) deacylase {ECO:0000313|EMBL:AFU59237.1}; EC=3.1.-.- {ECO:0000313|EMBL:AFU59237.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nit
Putative D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL02_NITGG
13_1_40cm_scaffold_5743_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2174..2797)
DNA (624bp) protein (208aa)
Putative rhodanese sulfurtransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFI1_NITGG
rhodanese sulfurtransferase
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera garg
13_1_40cm_scaffold_5743_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2978..4831)
DNA (1854bp) protein (618aa)
sir1; ferredoxin-sulfite/nitrite reductase (EC:1.7.7.1)
Ferredoxin-sulfite/nitrite reductase {ECO:0000313|EMBL:AFU57587.1}; EC=1.7.7.1 {ECO:0000313|EMBL:AFU57587.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitro
Ferredoxin-sulfite/nitrite reductase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II05_NITGG
13_1_40cm_scaffold_5743_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5372..5797)
DNA (426bp) protein (142aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILG8_NITGG
tRNA ribose 2'-O-methyltransferase
13_1_40cm_scaffold_5743_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5899..7011)
DNA (1113bp) protein (371aa)
GTPase HflX n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMM2_NITGG
GTP-binding protein
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososp
13_1_40cm_scaffold_5743_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7015..7236)
DNA (222bp) protein (74aa)
Putative MBF1 (Multiprotein Bridging factor) n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IG80_NITGG
MBF1 (multiprotein Bridging factor)
MBF1 {ECO:0000313|EMBL:ADK25963.1}; Flags: Fragment;; TaxID=497727 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitros
13_1_40cm_scaffold_5743_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7484..8554)
DNA (1071bp) protein (357aa)
Phosphate uptake regulator n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJW8_NITGG
phoU1; phosphate uptake regulator
Phosphate uptake regulator {ECO:0000313|EMBL:AFU60405.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphae
Displaying 9 items

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