ggKbase home page

13_1_40cm_scaffold_1230

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1230_1
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

comp(3..698)
DNA (696bp) protein (232aa)
Thymidylate synthase complementing protein ThyX n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AS89_9ARCH
Thymidylate synthase complementing protein ThyX {ECO:0000313|EMBL:CDI05444.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
Thymidylate synthase complementing protein ThyX
13_1_40cm_scaffold_1230_2

Not on your lists

comp(728..1009)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CW15_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF15791.1}; TaxID=1456258 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_71_E12.;"
hypothetical protein
13_1_40cm_scaffold_1230_3
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

1162..1980
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ART6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05446.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
cdcA; putative archaeal cell division protein CdvA
13_1_40cm_scaffold_1230_4
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

2067..3986
DNA (1920bp) protein (640aa)
acsA; Acetyl-coenzyme A synthetase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase {ECO:0000313|EMBL:AJW71123.1}; EC=6.2.1.1 {ECO:0000313|EMBL:AJW71123.1};; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumil
acetate--CoA ligase id=14427735 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_scaffold_1230_5
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(3979..4473)
DNA (495bp) protein (165aa)
Exported protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CXG8_9ARCH
Exported protein {ECO:0000313|EMBL:EGP93970.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum ko
hypothetical protein
13_1_40cm_scaffold_1230_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(4527..4877)
DNA (351bp) protein (117aa)
hypothetical protein id=14427790 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_scaffold_1230_7
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

4996..5451
DNA (456bp) protein (152aa)
Transcriptional regulator mntR n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATG0_9ARCH
Transcriptional regulator mntR {ECO:0000313|EMBL:CDI05815.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
DtxR family iron dependent repressor
13_1_40cm_scaffold_1230_8
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

comp(5452..7254)
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASX0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05816.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
ATPase
13_1_40cm_scaffold_1230_9
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

7339..8256
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AT44_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05817.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_scaffold_1230_10
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(8246..8608)
DNA (363bp) protein (121aa)
Two-component response regulator involved in modulation of flagellar n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B6N1_9ARCH
two-component response regulator involved in modulation of flagellar
Two-component response regulator involved in modulation of flagellar {ECO:0000313|EMBL:AFS81149.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.
13_1_40cm_scaffold_1230_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(8660..9028)
DNA (369bp) protein (123aa)
hypothetical protein id=14427794 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_scaffold_1230_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

9097..10950
DNA (1854bp) protein (618aa)
integral membrane sensor signal transduction histidine kinase id=14427795 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
integral membrane sensor signal transduction histidine kinase Tax=CSP1_1_Thaumarchaeota
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
13_1_40cm_scaffold_1230_13
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

11008..11205
DNA (198bp) protein (66aa)
peptidase U62 modulator of DNA gyrase id=14427797 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
peptidase U62 modulator of DNA gyrase Tax=CSP1_1_Thaumarchaeota
Peptidase U62 modulator of DNA gyrase
Displaying 13 items

View Taxonomy