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S_scaffold_287

Alias: S_Thermococci_40_79_29

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_287_1
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

1..489
DNA (489bp) protein (163aa)
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
Probable tRNA pseudouridine synthase D {ECO:0000255|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000255|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000255|HAMAP-Rule:MF_01082}; tRNA pseud
Probable tRNA pseudouridine synthase D
S_scaffold_287_2
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

501..1205
DNA (705bp) protein (235aa)
phosphoglycolate phosphatase (EC:3.1.3.18) rbh
Phosphoglycolate phosphatase {ECO:0000255|HAMAP-Rule:MF_01419}; Short=PGP {ECO:0000255|HAMAP-Rule:MF_01419};; Short=PGPase {ECO:0000255|HAMAP-Rule:MF_01419};; EC=3.1.3.18 {ECO:0000255|HAMAP-Rule:MF_01
Phosphoglycolate phosphatase
S_scaffold_287_3
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(1202..1954)
DNA (753bp) protein (251aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|RuleBase:RU000512};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococ
Orotidine 5'-phosphate decarboxylase rbh
Orotidine 5'-phosphate decarboxylase
S_scaffold_287_4
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(1944..2873)
DNA (930bp) protein (310aa)
Dihydroorotate dehydrogenase rbh
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule
Dihydroorotate dehydrogenase
S_scaffold_287_5
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(2858..3565)
DNA (708bp) protein (236aa)
dihydroorotate dehydrogenase electron transfer subunit rbh
Dihydroorotate dehydrogenase electron transfer subunit {ECO:0000313|EMBL:ACS89508.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source
Dihydroorotate dehydrogenase electron transfer subunit
S_scaffold_287_6
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(3558..4823)
DNA (1266bp) protein (422aa)
Dihydroorotase, multifunctional complex type (EC:3.5.2.3)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=604354 species="Archaea; Euryarchaeota; Thermoco
Dihydroorotase, multifunctional complex type
S_scaffold_287_7
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(4833..5285)
DNA (453bp) protein (151aa)
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase regulatory chain {ECO:0000255|HAMAP-Rule:MF_00002}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="T
Aspartate carbamoyltransferase regulatory chain
S_scaffold_287_8
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(5282..6202)
DNA (921bp) protein (307aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=604354 species="Arc
Aspartate carbamoyltransferase
S_scaffold_287_9
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

6281..6841
DNA (561bp) protein (187aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10) rbh
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rul
Orotate phosphoribosyltransferase
S_scaffold_287_10
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(6843..7121)
DNA (279bp) protein (93aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS89513.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
S_scaffold_287_11
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

7177..8436
DNA (1260bp) protein (420aa)
23S rRNA (uracil-5-)-methyltransferase
23S rRNA (Uracil-5-)-methyltransferase {ECO:0000313|EMBL:ACS89514.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus s
23S rRNA (Uracil-5-)-methyltransferase
S_scaffold_287_12
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

8488..8913
DNA (426bp) protein (142aa)
HTH-type transcriptional regulator lrpA
HTH-type transcriptional regulator lrpA {ECO:0000313|EMBL:ACS89515.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus
HTH-type transcriptional regulator lrpA
S_scaffold_287_13
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(9297..10421)
DNA (1125bp) protein (375aa)
NapA-type sodium/hydrogen antiporter
NapA-type sodium/hydrogen antiporter {ECO:0000313|EMBL:ACS89516.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sib
NapA-type sodium/hydrogen antiporter
S_scaffold_287_14
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(10423..11565)
DNA (1143bp) protein (381aa)
NapA-type sodium/hydrogen antiporter rbh
NapA-type sodium/hydrogen antiporter {ECO:0000313|EMBL:ACS89517.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sib
NapA-type sodium/hydrogen antiporter
S_scaffold_287_15
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(11584..12141)
DNA (558bp) protein (186aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS89518.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
S_scaffold_287_16
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

12327..13781
DNA (1455bp) protein (485aa)
Oxidoreductase rbh
Oxidoreductase {ECO:0000313|EMBL:ACS89519.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strain MM 739
Oxidoreductase
S_scaffold_287_17
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

13882..14736
DNA (855bp) protein (285aa)
ATPase, PP-loop superfamily
ATPase, PP-loop superfamily {ECO:0000313|EMBL:ACS89520.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (s
ATPase, PP-loop superfamily
S_scaffold_287_18
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(14748..15155)
DNA (408bp) protein (136aa)
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase {ECO:0000313|EMBL:ACS89521.1}; EC=2.4.1.25 {ECO:0000313|EMBL:ACS89521.1};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermo
4-alpha-glucanotransferase
Displaying 18 items

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