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rifoxyc1_full_scaffold_4180

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyc1_full_scaffold_4180_1

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87..488
DNA (402bp) protein (134aa)
TATA-box-binding protein {ECO:0000313|EMBL:KHO51208.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
2-alkenal reductase; K03120 transcription initiation factor TFIID TATA-box-binding protein id=5048857 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
TATA-box-binding protein
rifoxyc1_full_scaffold_4180_2
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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534..2582
DNA (2049bp) protein (683aa)
mcm; replicative DNA helicase Mcm (EC:3.6.1.-); K10726 replicative DNA helicase Mcm [EC:3.6.4.-] Tax=RBG_13_Pacearchaeota_33_26_curated
DNA replication initiator (Cdc21/Cdc54) n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AET4_9EURY id=5103224 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA replication initiator Cdc21/Cdc54
rifoxyc1_full_scaffold_4180_3
unknown

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2857..3105
DNA (249bp) protein (83aa)

This feature has no annotations

rifoxyc1_full_scaffold_4180_4
AR1, Pacearchaeaota, DPANN, Archaea

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comp(3135..3764)
DNA (630bp) protein (210aa)
hypothetical protein
id=5103725 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR1
rifoxyc1_full_scaffold_4180_5
CG_Pacearch_06, Pacearchaeota, Archaea

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comp(3766..4194)
DNA (429bp) protein (143aa)
Tax=CG_Pacearch_06
rifoxyc1_full_scaffold_4180_6
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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4417..5043
DNA (627bp) protein (209aa)
Uncharacterized protein conserved in archaea n=2 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QHY8_9EURY id=5103225 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
hypothetical protein Tax=RBG_13_Pacearchaeota_33_26_curated
rifoxyc1_full_scaffold_4180_7
unknown

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5046..5318
DNA (273bp) protein (91aa)

This feature has no annotations

rifoxyc1_full_scaffold_4180_8
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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5430..5840
DNA (411bp) protein (137aa)
Translation initiation factor 2 subunit beta n=2 Tax=Methanothermobacter RepID=IF2B_METTH id=5103227 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
eif2b; translation initiation factor 2 subunit beta (aeIF-2b); K03238 translation initiation factor 2 subunit 2 Tax=RBG_13_Pacearchaeota_33_26_curated
Translation initiation factor 2 subunit beta
rifoxyc1_full_scaffold_4180_9
GWC1_OP11_42_9, Woesebacteria, Microgenomates, Bacteria

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5933..6124
DNA (192bp) protein (64aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS76734.1}; TaxID=1618584 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC1_42_9.;"
id=3133156 bin=GWC2_TM7_48_9 species=OP11_3 genus=OP11_3 taxon_order=OP11_3 taxon_class=OP11_3 phylum=OP11 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
rifoxyc1_full_scaffold_4180_10
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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6189..6488
DNA (300bp) protein (100aa)
hypothetical protein; K09148 hypothetical protein Tax=RBG_16_Pacearchaeota_35_8_curated
Uncharacterized protein id=5800099 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifoxyc1_full_scaffold_4180_11
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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6530..6874
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363D148
translation initiation factor IF-1; K03236 translation initiation factor 1A Tax=RBG_13_Pacearchaeota_33_26_curated
Translation initiation factor 1A
rifoxyc1_full_scaffold_4180_12

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6917..7417
DNA (501bp) protein (167aa)
Conserved Archaeal protein n=3 Tax=Sulfolobus acidocaldarius RepID=Q4JA52_SULAC
Marine sediment metagenome DNA, contig: S12H4_C04473 {ECO:0000313|EMBL:GAI63470.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
putative RNA-processing protein
Displaying 12 items

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