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13_1_20cm_2_scaffold_208

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_208_1
CG_Woesearch_02, Woesearchaeota, Archaea

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2..400
DNA (399bp) protein (133aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=CG_Woesearch_02
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JPI8_SYNJB
13_1_20cm_2_scaffold_208_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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549..1676
DNA (1128bp) protein (376aa)
Putative transposase, IS605 OrfB family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFZ7_NITGG
Putative transposase, IS605 OrfB family {ECO:0000313|EMBL:AFU60326.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
transposase, IS605 OrfB family
13_1_20cm_2_scaffold_208_3
unknown

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1923..2135
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_20cm_2_scaffold_208_4
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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2238..2525
DNA (288bp) protein (96aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFW8_9EURY
nucleic acid binding OB-fold tRNA/helicase-type Tax=RBG_13_Bathyarchaeota_38_9_curated
OB-fold nucleic acid binding protein
13_1_20cm_2_scaffold_208_5
uncultured Acetothermia bacterium, Acetothermia, Bacteria

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comp(2573..3334)
DNA (762bp) protein (254aa)
HD domain protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SKY9_9BACT
HD domain protein {ECO:0000313|EMBL:BAL56825.1}; TaxID=236499 species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
metal dependent phosphohydrolase
13_1_20cm_2_scaffold_208_6
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3508..4281
DNA (774bp) protein (258aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VLB6_9EURY
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ELY37762.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetens
3-hydroxyacyl-CoA dehydrogenase
13_1_20cm_2_scaffold_208_trna_1
unknown

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comp(5088..5183)
DNA (96bp)
transferRNA
13_1_20cm_2_scaffold_208_7
RBG_16_Archaea_50_20_curated, Archaea

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5208..5753
DNA (546bp) protein (182aa)
Putative archease protein family (DUF101/UPF0211) n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INA3_NITGG
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_208_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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5868..7340
DNA (1473bp) protein (491aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=RBG_13_Bathyarchaeota_38_9_curated
tRNA-splicing ligase RtcB n=1 Tax=Thermofilum sp. 1910b RepID=S5ZCV4_9CREN
tRNA-splicing ligase RtcB
13_1_20cm_2_scaffold_208_9
CG_Elusi_03, Elusimicrobia, Bacteria

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comp(7344..8408)
DNA (1065bp) protein (355aa)
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8); K15916 glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] Tax=CG_Elusi_03
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8 5.3.1.9)
Bifunctional phosphoglucose/phosphomannose isomerase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T9Y2_9EURY
13_1_20cm_2_scaffold_208_10
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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8490..9344
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI00036D573D
hypothetical protein; K09142 hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_20cm_2_scaffold_208_11

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9345..10349
DNA (1005bp) protein (335aa)
50S ribosomal protein L3 n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=RL3_ARCFU
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|SAAS:SAAS00023038}; TaxID=1368239 species="Archaea; Crenarchaeota; miscellaneous Crenarchaeota group; environmental samples.;" so
archaeal ribosomal protein L3
13_1_20cm_2_scaffold_208_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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10386..11129
DNA (744bp) protein (248aa)
50S ribosomal protein L4 n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RCD6_METFO
50S ribosomal protein L4P; K02930 large subunit ribosomal protein L4e Tax=RBG_13_Bathyarchaeota_38_9_curated
rpl4p; 50S ribosomal protein L4P
13_1_20cm_2_scaffold_208_13
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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11135..11404
DNA (270bp) protein (90aa)
50S ribosomal protein L23P n=1 Tax=uncultured Acidilobus sp. MG RepID=V4LVY6_9CREN
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RBG_13_Bathyarchaeota_38_9_curated
rplW; 50S ribosomal protein L23
13_1_20cm_2_scaffold_208_14
RBG_16_Archaea_50_20_curated, Archaea

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11420..12145
DNA (726bp) protein (242aa)
50S ribosomal protein L2 n=1 Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7D9T6_STAHD
rpl2p; 50S ribosomal protein L2P; K02886 large subunit ribosomal protein L2 Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L2
13_1_20cm_2_scaffold_208_15

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12208..12609
DNA (402bp) protein (134aa)
30S ribosomal protein S19P n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4V2_9ARCH
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
small subunit ribosomal protein S19
13_1_20cm_2_scaffold_208_16
RBG_16_Archaea_50_20_curated, Archaea

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12933..13088
DNA (156bp) protein (52aa)
tyrosyl-tRNA ligase (EC:6.1.1.1) Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_208_17
RBG_16_Archaea_50_20_curated, Archaea

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13085..14041
DNA (957bp) protein (319aa)
tyrosyl-tRNA ligase (EC:6.1.1.1) Tax=RBG_16_Archaea_50_20_curated
tyrosyl-tRNA ligase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5H3_9EURY
13_1_20cm_2_scaffold_208_18
RBG_16_Archaea_50_20_curated, Archaea

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14047..14535
DNA (489bp) protein (163aa)
UPF0292 protein MTH_890 n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=Y890_METTH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_208_19
unknown

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comp(14704..14874)
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_20cm_2_scaffold_208_20
Sulfolobales archaeon AZ1, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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15324..16568
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI000371BA43
Family 2 glycosyl transferase {ECO:0000313|EMBL:EWG07444.1}; TaxID=1326980 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; unclassified Sulfolobales.;" source="Sulfolobales archaeon AZ1.;
family 2 glycosyl transferase
13_1_20cm_2_scaffold_208_21
unknown

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16705..16914
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_20cm_2_scaffold_208_22
unknown

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comp(17215..17670)
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_20cm_2_scaffold_208_23
unknown

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17854..17952
DNA (99bp) protein (33aa)

This feature has no annotations

13_1_20cm_2_scaffold_208_24
unknown

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comp(17934..18521)
DNA (588bp) protein (196aa)

This feature has no annotations

13_1_20cm_2_scaffold_208_25
unknown

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comp(18550..20079)
DNA (1530bp) protein (510aa)

This feature has no annotations

13_1_20cm_2_scaffold_208_26
unknown

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20103..20411
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_20cm_2_scaffold_208_27
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(20339..21268)
DNA (930bp) protein (310aa)
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI000368F04E rbh
ABC-2 type transporter {ECO:0000313|EMBL:ADN49745.1}; TaxID=572478 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Vulcanisaeta.;" source="Vulcanisaeta distributa (st
ABC-2 type transporter
13_1_20cm_2_scaffold_208_28
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(21294..22337)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00036F1F31
ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
ABC transporter ATP-binding protein
13_1_20cm_2_scaffold_208_29
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(22334..23002)
DNA (669bp) protein (223aa)
Transcriptional regulator, PadR-like family n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGB3_9EURY
hypothetical protein Tax=RBG_16_Thaumarchaeota_49_8_curated
PadR-like family transcriptional regulator
Displaying items 1-30 of 33 in total

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