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13_1_40cm_2_scaffold_437

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_437_1

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17..427
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon W4-93a RepID=H9BWV5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKN03567.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_40cm_2_scaffold_437_2
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(628..825)
DNA (198bp) protein (66aa)
RNA polymerase Rbp10 n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KJQ4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EPA06650.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
RNA polymerase Rbp10
13_1_40cm_2_scaffold_437_3
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(866..1174)
DNA (309bp) protein (103aa)
30S ribosomal protein S10P n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AT24_9ARCH
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archae
rpsJ; ribosomal protein S10
13_1_40cm_2_scaffold_437_4
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(1183..2490)
DNA (1308bp) protein (436aa)
elongation factor 1-alpha (EC:2.7.7.4)
Putative elongation factor 1-alpha n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATN5_9ARCH
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
13_1_40cm_2_scaffold_437_5
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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2623..3954
DNA (1332bp) protein (444aa)
hypothetical protein id=14427777 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_2_scaffold_437_6

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4070..4561
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI0003645A56
Nucleotide-binding Rossmann fold-containing protein {ECO:0000313|EMBL:AIF22976.1}; TaxID=1456378 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote SAT
TIGR00725 family protein
13_1_40cm_2_scaffold_437_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4542..5684)
DNA (1143bp) protein (381aa)
3-hydroxybutyryl-CoA dehydrogenase id=14427769 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon
3-hydroxybutyryl-CoA dehydrogenase Tax=CSP1_1_Thaumarchaeota
3-hydroxybutyryl-CoA dehydrogenase
13_1_40cm_2_scaffold_437_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5730..6008)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH08_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59140.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_2_scaffold_437_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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6098..6757
DNA (660bp) protein (220aa)
hypothetical protein id=14428550 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_2_scaffold_437_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(7007..7348)
DNA (342bp) protein (114aa)
hypothetical protein id=14428308 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_2_scaffold_437_11

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comp(7492..7746)
DNA (255bp) protein (85aa)
Transcriptional regulator, AsnC family n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A3G5_NITMS
Uncharacterized protein {ECO:0000313|EMBL:KKK88361.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AsnC family transcriptional regulator
13_1_40cm_2_scaffold_437_12
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(7778..8539)
DNA (762bp) protein (254aa)
Uncharacterized protein n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KKT1_9ARCH
conserved exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AJW71584.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.
13_1_40cm_2_scaffold_437_13
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(8605..9942)
DNA (1338bp) protein (446aa)
DEAD/DEAH box helicase; K10896 fanconi anemia group M protein id=14428331 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
DEAD/DEAH box helicase; K10896 fanconi anemia group M protein Tax=CSP1_1_Thaumarchaeota
DEAD/DEAH box helicase
13_1_40cm_2_scaffold_437_14
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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10162..10698
DNA (537bp) protein (179aa)
zinc-binding CMP/dCMP deaminase; K01493 dCMP deaminase [EC:3.5.4.12] id=14428332 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
zinc-binding CMP/dCMP deaminase; K01493 dCMP deaminase [EC:3.5.4.12] Tax=CSP1_1_Thaumarchaeota
Cytidine and deoxycytidylate deaminase zinc-binding region
13_1_40cm_2_scaffold_437_15
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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10705..13263
DNA (2559bp) protein (853aa)
DNA polymerase I; K02319 DNA polymerase I [EC:2.7.7.7] id=14428333 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
DNA polymerase I; K02319 DNA polymerase I [EC:2.7.7.7] Tax=CSP1_1_Thaumarchaeota
DNA polymerase I (EC:2.7.7.7)
13_1_40cm_2_scaffold_437_16
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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13619..13849
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BE41_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS82611.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.
13_1_40cm_2_scaffold_437_17
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(13855..15705)
DNA (1851bp) protein (617aa)
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] id=14428306 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=CSP1_1_Thaumarchaeota
threonyl-tRNA synthetase
13_1_40cm_2_scaffold_437_trna_1
unknown

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15837..15929
DNA (93bp)
transferRNA
13_1_40cm_2_scaffold_437_18

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16047..17291
DNA (1245bp) protein (415aa)
Divalent metal cation transporter MntH n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6DR80_9BACI
Divalent metal cation transporter MntH {ECO:0000313|EMBL:KHO52422.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
natural resistance-associated macrophage protein metal ion transporter NRAMP
13_1_40cm_2_scaffold_437_19
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(17303..18511)
DNA (1209bp) protein (403aa)
ilvA; threonine ammonia-lyase (EC:4.3.1.19)
threonine dehydratase id=14428244 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
threonine dehydratase Tax=CSP1_1_Thaumarchaeota
13_1_40cm_2_scaffold_437_20
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(18810..19643)
DNA (834bp) protein (278aa)
hypothetical protein id=14428245 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_2_scaffold_437_21
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

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19863..20657
DNA (795bp) protein (265aa)
Adenylate/guanylate cyclase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASJ8_9ARCH rbh
adenylate/guanylate cyclase catalytic domain protein
Adenylate/guanylate cyclase catalytic domain protein {ECO:0000313|EMBL:AJA92593.1}; TaxID=1410606 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidatus Nitrosopelagicus b
13_1_40cm_2_scaffold_437_22
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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20946..21308
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BCA5_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS82742.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.
13_1_40cm_2_scaffold_437_23
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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21346..21738
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CWR0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGP93712.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarch
hypothetical protein
13_1_40cm_2_scaffold_437_24
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(21735..22145)
DNA (411bp) protein (137aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASW8_9ARCH
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:CDI05620.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_2_scaffold_437_25

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comp(22182..22340)
DNA (159bp) protein (53aa)
Transcriptional regulator AsnC family {ECO:0000313|EMBL:AIF13091.1}; TaxID=1456211 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_59_E10.;"
AsnC family transcriptional regulator id=14428253 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
transcriptional regulator, AsnC family
13_1_40cm_2_scaffold_437_26

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comp(22385..22633)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A1B6_NITMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFM21265.1}; TaxID=1502289 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-
13_1_40cm_2_scaffold_437_27
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

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comp(22696..22929)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AT53_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA92898.1}; TaxID=1410606 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidatus Nitrosopelagicus brevis.;"
13_1_40cm_2_scaffold_437_trna_2
unknown

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comp(23079..23152)
DNA (74bp)
transferRNA
13_1_40cm_2_scaffold_437_28
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(23194..23736)
DNA (543bp) protein (181aa)
Cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
ATP--cobalamin adenosyltransferase id=14428256 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
ATP--cobalamin adenosyltransferase Tax=CSP1_1_Thaumarchaeota
Displaying items 1-30 of 33 in total

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