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13_1_40cm_2_scaffold_8552

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_8552_1

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comp(53..1090)
DNA (1038bp) protein (346aa)
Isocitrate/isopropylmalate dehydrogenase (IDH1, IDH2, icd) {ECO:0000313|EMBL:AIE98394.1}; EC=1.1.1.42 {ECO:0000313|EMBL:AIE98394.1};; TaxID=1455970 species="Archaea; Thaumarchaeota; environmental samp
isocitrate/isopropylmalate dehydrogenase (EC:1.1.1.42)
isocitrate dehydrogenase n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00035C2D7B rbh
13_1_40cm_2_scaffold_8552_2

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1189..1932
DNA (744bp) protein (248aa)
Metallophosphoesterase n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KMK1_9ARCH
Metallophosphoesterase {ECO:0000313|EMBL:AIE94884.1}; TaxID=1455924 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_54_E04.;"
Metallophosphoesterase
13_1_40cm_2_scaffold_8552_trna_1
unknown

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1983..2066
DNA (84bp)
transferRNA
13_1_40cm_2_scaffold_8552_3

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2355..2528
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BG62_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF07341.1}; TaxID=1456096 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_201_H03.;"
hypothetical protein
13_1_40cm_2_scaffold_8552_4

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comp(2518..3339)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CU53_9ARCH rbh
Transglutaminase-like superfamily protein {ECO:0000313|EMBL:KFM15434.1}; TaxID=1502291 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarch
hypothetical protein
13_1_40cm_2_scaffold_8552_5

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comp(3336..3578)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B8H5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKL67395.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_40cm_2_scaffold_8552_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4655..6265)
DNA (1611bp) protein (537aa)
2-alkenal reductase id=14427992 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
2-alkenal reductase Tax=CSP1_1_Thaumarchaeota
2-alkenal reductase
13_1_40cm_2_scaffold_8552_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(6378..7202)
DNA (825bp) protein (275aa)
short-chain dehydrogenase/reductase SDR id=14427991 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
short-chain dehydrogenase/reductase SDR Tax=CSP1_1_Thaumarchaeota
PF08643 family protein
13_1_40cm_2_scaffold_8552_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(7263..9713)
DNA (2451bp) protein (817aa)
DEAD/DEAH box helicase id=14427989 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
DEAD/DEAH box helicase Tax=CSP1_1_Thaumarchaeota
DEAD/DEAH box helicase domain protein
13_1_40cm_2_scaffold_8552_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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9810..10697
DNA (888bp) protein (296aa)
3-beta hydroxysteroid dehydrogenase/isomerase family protein id=14427981 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
3-beta hydroxysteroid dehydrogenase/isomerase family protein Tax=CSP1_1_Thaumarchaeota
putative nucleoside-diphosphate sugar epimerase
13_1_40cm_2_scaffold_8552_10

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10732..11127
DNA (396bp) protein (132aa)
Methyltransferase type 11 (UbiE) {ECO:0000313|EMBL:AIF18255.1}; EC=2.1.1.163 {ECO:0000313|EMBL:AIF18255.1};; TaxID=1456303 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured
Putative ubiE/COQ5 methyltransferase family protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW133O4 RepID=B3T4F5_9ARCH
methyltransferase, UbiE/COQ5 family
13_1_40cm_2_scaffold_8552_11
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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11069..11353
DNA (285bp) protein (95aa)
Methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:AJW70319.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF
type 11 methyltransferase id=14427984 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_2_scaffold_8552_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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11355..12494
DNA (1140bp) protein (380aa)
major facilitator transporter id=14427985 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
major facilitator transporter Tax=CSP1_1_Thaumarchaeota
transporter, major facilitator family protein
13_1_40cm_2_scaffold_8552_13
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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12529..12885
DNA (357bp) protein (119aa)
sec-independent translocation protein mttA/Hcf106 id=14427986 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
sec-independent translocation protein mttA/Hcf106 Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_2_scaffold_8552_14
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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12946..14193
DNA (1248bp) protein (416aa)
gdhA; Glutamate dehydrogenase (EC:1.4.1.3)
Glutamate dehydrogenase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AU24_9ARCH rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_40cm_2_scaffold_8552_15
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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14221..14448
DNA (228bp) protein (76aa)
AsnC family transcriptional regulator n=2 Tax=Nitrosopumilaceae RepID=K0BA15_9ARCH
AsnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:AFS81296.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopu
13_1_40cm_2_scaffold_8552_16
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(14508..14858)
DNA (351bp) protein (117aa)
Iron-sulfur cluster assembly accessory protein n=2 Tax=Nitrosopumilaceae RepID=K0B768_9ARCH
iron-sulfur cluster assembly accessory protein
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:AFS81334.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus
13_1_40cm_2_scaffold_8552_17
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(14935..15693)
DNA (759bp) protein (253aa)
crt; 3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
enoyl-CoA hydratase/isomerase id=14427976 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
enoyl-CoA hydratase/isomerase Tax=CSP1_1_Thaumarchaeota
13_1_40cm_2_scaffold_8552_18
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(15719..16705)
DNA (987bp) protein (329aa)
Putative CoA-binding domain protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATQ7_9ARCH
Putative CoA-binding domain protein {ECO:0000313|EMBL:CDI06027.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
acyl-CoA synthetase (NDP forming)
13_1_40cm_2_scaffold_8552_19
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(16759..17802)
DNA (1044bp) protein (348aa)
CoA-binding domain-containing protein id=14427977 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
CoA-binding domain-containing protein Tax=CSP1_1_Thaumarchaeota
CoA-binding domain-containing protein
13_1_40cm_2_scaffold_8552_20

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comp(17877..18566)
DNA (690bp) protein (230aa)
GMP synthase glutamine-hydrolyzing protein {ECO:0000313|EMBL:KFM19594.1}; EC=6.3.5.2 {ECO:0000313|EMBL:KFM19594.1};; TaxID=1502295 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine
Glutamine amidotransferase class-I n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A2G7_NITMS
class I glutamine amidotransferase
13_1_40cm_2_scaffold_8552_21

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18608..18976
DNA (369bp) protein (123aa)
TOPRIM domain-containing protein id=14427979 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Toprim domain protein {ECO:0000313|EMBL:KFM14980.1}; TaxID=1502294 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-O1
TOPRIM domain-containing protein
13_1_40cm_2_scaffold_8552_22
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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19052..20197
DNA (1146bp) protein (382aa)
dnaG; DNA primase DnaG (EC:2.7.7.-)
DNA primase id=14427974 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
DNA primase Tax=CSP1_1_Thaumarchaeota
13_1_40cm_2_scaffold_8552_23
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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20203..20889
DNA (687bp) protein (229aa)
ribK; Riboflavin kinase (EC:2.7.1.161)
hypothetical protein id=14427973 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
hypothetical protein Tax=CSP1_1_Thaumarchaeota
13_1_40cm_2_scaffold_8552_24
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(20907..21533)
DNA (627bp) protein (209aa)
cytidyltransferase-like protein Tax=CSP1_1_Thaumarchaeota
cytidyltransferase-like protein id=14427971 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
cytidyltransferase-like protein
13_1_40cm_2_scaffold_8552_25
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(21563..22609)
DNA (1047bp) protein (349aa)
diphthine synthase (EC:2.1.1.98); K00586 diphthine synthase [EC:2.1.1.98] id=14427970 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
diphthine synthase (EC:2.1.1.98); K00586 diphthine synthase [EC:2.1.1.98] Tax=CSP1_1_Thaumarchaeota
Diphthine synthase (EC:2.1.1.98)
13_1_40cm_2_scaffold_8552_26
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(22660..23802)
DNA (1143bp) protein (381aa)
N-acetyl-ornithine/N-acetyl-lysine deacetylase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATP7_9ARCH rbh
N-acetyl-ornithine/N-acetyl-lysine deacetylase {ECO:0000313|EMBL:CDI06017.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
N-acetyl-ornithine/N-acetyl-lysine deacetylase
13_1_40cm_2_scaffold_8552_27
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(23806..24654)
DNA (849bp) protein (283aa)
Lysine biosynthesis enzyme LysX n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CZ47_9ARCH
Lysine biosynthesis enzyme LysX {ECO:0000313|EMBL:EGP94205.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nit
lysine biosynthesis protein LysX
13_1_40cm_2_scaffold_8552_28
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(24749..25939)
DNA (1191bp) protein (397aa)
aksA; putative homocitrate synthase AksA (EC:2.3.3.- 2.3.3.14)
Pyruvate carboxyltransferase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATV1_9ARCH
Pyruvate carboxyltransferase {ECO:0000313|EMBL:CDI06014.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_40cm_2_scaffold_8552_29

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comp(26056..26475)
DNA (420bp) protein (140aa)
AsnC family transcription regulator (LysM) {ECO:0000313|EMBL:AIF18277.1}; TaxID=1456303 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_82_C03.;
AsnC family transcriptional regulator id=14427965 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
putative HTH-type transcriptional regulator LysM
Displaying items 1-30 of 33 in total

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