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13_1_40CM_2_Archaea_39_4

13_1_40CM_2_Thaumarchaeota_38_5

Consensus taxonomy: Thaumarchaeota  →  TACK  →  Archaea

Displaying items 101-150 of 216 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
13_1_40cm_2_scaffold_174885
Species: Nitrososphaera viennensis (100%)
1 1447 bp 35.80 3.01 59.09
13_1_40cm_2_scaffold_54674
Domain: Archaea (66.67%)
3 2536 bp 42.11 3.02 91.32
13_1_40cm_2_scaffold_243411
Species: uncultured crenarchaeote (50%)
2 1229 bp 42.47 3.05 44.67
13_1_40cm_2_scaffold_180390
Species: uncultured archaeon (50%)
2 1425 bp 39.23 3.05 34.67
13_1_40cm_2_scaffold_244958
Species: CSP1_1_Thaumarchaeota (50%)
2 1225 bp 35.43 3.06 90.12
13_1_40cm_2_scaffold_152298
Species: AR5 (50%)
2 2057 bp 42.78 3.06 74.38
13_1_40cm_2_scaffold_544236
Species: CSP1_1_Thaumarchaeota (50%)
2 1080 bp 39.91 3.06 92.50
13_1_40cm_2_scaffold_21566
Domain: Archaea (71.43%)
7 3825 bp 40.73 3.10 89.96
13_1_40cm_2_scaffold_137994
Species: uncultured crenarchaeote (100%)
1 1625 bp 39.32 3.14 62.40
13_1_40cm_2_scaffold_45697
Genus: Nitrososphaera (60%)
5 2752 bp 34.70 3.16 73.80
13_1_40cm_2_scaffold_172525
Species: marine sediment metagenome (50%)
2 1456 bp 37.57 3.19 95.19
13_1_40cm_2_scaffold_196170
Species: CSP1_1_Thaumarchaeota (50%)
2 1369 bp 41.86 3.29 100.15
13_1_40cm_2_scaffold_27083
Genus: Nitrososphaera (60%)
5 3463 bp 35.84 3.29 68.09
13_1_40cm_2_scaffold_162283
Domain: Archaea (66.67%)
3 2861 bp 40.69 3.36 68.47
13_1_40cm_2_scaffold_143230
Species: Nitrososphaera viennensis (50%)
2 1594 bp 36.76 3.39 67.57
13_1_40cm_2_scaffold_5827
Genus: Nitrososphaera (55.56%)
9 6482 bp 41.95 3.40 77.38
13_1_40cm_2_scaffold_7787
Species: Nitrososphaera viennensis (50%)
4 5792 bp 38.45 3.44 93.59
13_1_40cm_2_scaffold_521848
Species: marine sediment metagenome (66.67%)
3 1244 bp 37.62 3.51 100.56
13_1_40cm_2_scaffold_229659
Species: uncultured marine thaumarchaeote KM3_153_E08 (50%)
2 1266 bp 35.86 3.55 44.79
13_1_40cm_2_scaffold_326937
Species: CSP1_1_Thaumarchaeota (100%)
1 1057 bp 33.49 3.69 53.93
13_1_40cm_2_scaffold_160884
Species: uncultured marine thaumarchaeote KM3_190_E06 (50%)
2 1506 bp 39.91 3.69 94.22
13_1_40cm_2_scaffold_18725
Genus: Nitrososphaera (55.56%)
9 6119 bp 36.15 3.70 63.83
13_1_40cm_2_scaffold_2610
Domain: Archaea (72.73%)
11 11484 bp 41.04 3.78 89.21
13_1_40cm_2_scaffold_154566
Species: marine sediment metagenome (50%)
2 1536 bp 40.36 3.91 98.63
13_1_40cm_2_scaffold_244992
Species: uncultured crenarchaeote (100%)
1 1225 bp 41.96 3.92 88.90
13_1_40cm_2_scaffold_339357
Species: CSP1_1_Thaumarchaeota (50%)
2 1033 bp 34.27 3.92 54.60
13_1_40cm_2_scaffold_207992
Species: CSP1_1_Thaumarchaeota (50%)
2 1330 bp 37.74 3.95 84.36
13_1_40cm_2_scaffold_180881
Order: Nitrosopumilales (66.67%)
3 1423 bp 37.74 4.01 95.08
13_1_40cm_2_scaffold_205656
Species: CSP1_1_Thaumarchaeota (100%)
1 1337 bp 42.48 4.04 99.85
13_1_40cm_2_scaffold_206544
Species: CSP1_1_Thaumarchaeota (50%)
2 1335 bp 37.60 4.04 98.88
13_1_40cm_2_scaffold_324
Domain: Archaea (57.14%)
14 18156 bp 34.84 4.10 95.31
13_1_40cm_2_scaffold_77985
Species: Candidatus Nitrososphaera evergladensis (50%)
2 2149 bp 37.65 4.12 84.46
13_1_40cm_2_scaffold_8517
Domain: Archaea (64.71%)
17 17433 bp 41.93 4.13 82.14
13_1_40cm_2_scaffold_251357
Species: uncultured crenarchaeote 29d5 (100%)
1 1209 bp 35.57 4.22 52.11
13_1_40cm_2_scaffold_501493
Species: CSP1_1_Thaumarchaeota (50%)
2 1166 bp 36.54 4.25 89.28
13_1_40cm_2_scaffold_240712
Species: marine sediment metagenome (50%)
2 1236 bp 40.05 4.25 100.24
13_1_40cm_2_scaffold_96831
Domain: Archaea (60%)
5 2551 bp 41.75 4.29 72.09
13_1_40cm_2_scaffold_282660
Species: uncultured marine thaumarchaeote SAT1000_51_C10 (100%)
1 1140 bp 37.11 4.34 100.00
13_1_40cm_2_scaffold_36402
Order: Nitrosopumilales (71.43%)
7 4517 bp 36.31 4.45 85.48
13_1_40cm_2_scaffold_75285
Phylum: Thaumarchaeota (50%)
4 2990 bp 35.42 4.46 84.48
13_1_40cm_2_scaffold_77548
Species: CSP1_1_Thaumarchaeota (100%)
1 2155 bp 42.65 4.52 85.75
13_1_40cm_2_scaffold_158981
Domain: Archaea (60%)
5 3394 bp 42.55 4.60 55.51
13_1_40cm_2_scaffold_1577
Genus: Nitrososphaera (52.63%)
19 14915 bp 41.70 4.63 76.33
13_1_40cm_2_scaffold_389162
Order: Nitrosopumilales (66.67%)
3 1538 bp 40.31 4.78 88.56
13_1_40cm_2_scaffold_300782
Species: Nitrososphaera viennensis (50%)
2 1105 bp 43.08 4.89 65.43
13_1_40cm_2_scaffold_21548
Phylum: Thaumarchaeota (50%)
4 5135 bp 38.87 4.92 85.82
13_1_40cm_2_scaffold_200567
Species: Candidatus Nitrososphaera evergladensis (50%)
4 2064 bp 33.58 5.01 73.69
13_1_40cm_2_scaffold_365596
Species: Candidatus Nitrosopumilus sp. NF5 (50%)
2 1554 bp 39.00 5.02 108.69
13_1_40cm_2_scaffold_338826
Species: CSP1_1_Thaumarchaeota (100%)
1 1034 bp 37.04 5.08 51.93
13_1_40cm_2_scaffold_309427
Species: Nitrososphaera viennensis (50%)
2 1089 bp 41.23 5.10 82.37
Displaying items 101-150 of 216 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.