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13_1_40cm_2_scaffold_1902

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1902_1
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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1..1500
DNA (1500bp) protein (500aa)
Putative translation initiation factor IF-2A n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR70_9ARCH rbh
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
translation initiation factor IF-2
13_1_40cm_2_scaffold_1902_2
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1497..1883)
DNA (387bp) protein (129aa)
Thioredoxin n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A2Z8_NITMS
thioredoxin
Thioredoxin {ECO:0000313|EMBL:ABX12126.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SCM1).;"
13_1_40cm_2_scaffold_1902_3

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comp(1918..2334)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=3 Tax=environmental samples RepID=B3T460_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF18745.1}; TaxID=1456311 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_84_D12.;"
archease protein family
13_1_40cm_2_scaffold_1902_4
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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2451..3707
DNA (1257bp) protein (419aa)
hisS; histidine--tRNA ligase (EC:6.1.1.21)
Histidyl-tRNA synthetase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYZ7_9ARCH rbh
Histidyl-tRNA synthetase {ECO:0000313|EMBL:EGP92965.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarc
13_1_40cm_2_scaffold_1902_5

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comp(3691..4290)
DNA (600bp) protein (200aa)
Translation initiation factor 6 n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW133M9 RepID=B3T462_9ARCH
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=1456151 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncu
translation initiation factor
13_1_40cm_2_scaffold_1902_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4481..4888
DNA (408bp) protein (136aa)
Putative 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILJ5_NITGG
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Putative 4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:AFU59517.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nit
13_1_40cm_2_scaffold_1902_7
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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4936..5469
DNA (534bp) protein (178aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR83_9ARCH
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:CDI05127.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
4Fe-4S ferredoxin
13_1_40cm_2_scaffold_1902_trna_1
unknown

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5587..5670
DNA (84bp)
transferRNA
13_1_40cm_2_scaffold_1902_8
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(5674..6513)
DNA (840bp) protein (280aa)
Replication factor C small subunit n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARU2_9ARCH
Replication factor C small subunit {ECO:0000313|EMBL:CDI05128.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
replication factor C
13_1_40cm_2_scaffold_1902_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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6931..7446
DNA (516bp) protein (172aa)
hypothetical protein id=14427533 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
GINS complex protein
13_1_40cm_2_scaffold_1902_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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7443..9524
DNA (2082bp) protein (694aa)
MCM family protein id=14427532 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
MCM family protein Tax=CSP1_1_Thaumarchaeota
MCM family protein
13_1_40cm_2_scaffold_1902_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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9521..9844
DNA (324bp) protein (108aa)
DEAD/DEAH box helicase; K03726 helicase [EC:3.6.4.-] id=14427531 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
DEAD/DEAH box helicase; K03726 helicase [EC:3.6.4.-] Tax=CSP1_1_Thaumarchaeota
putative ski2-type helicase (EC:3.6.4.-)
Displaying 12 items

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