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13_1_40cm_3_scaffold_1247

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1247_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(76..549)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH59_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59215.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1247_trna_2
unknown

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comp(712..853)
DNA (142bp)
transferRNA
13_1_40cm_3_scaffold_1247_2
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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952..1092
DNA (141bp) protein (47aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84388.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_40cm_3_scaffold_1247_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1126..1413
DNA (288bp) protein (96aa)
Putative nucleic acid binding OB-fold tRNA/helicase-type n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IH57_NITGG
nucleic acid binding OB-fold tRNA/helicase-type
Putative nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:AFU59210.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrosos
13_1_40cm_3_scaffold_1247_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1410..2195)
DNA (786bp) protein (262aa)
Putative 3-isopropylmalate dehydratase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INE0_NITGG rbh
3-isopropylmalate dehydratase
Putative 3-isopropylmalate dehydratase {ECO:0000313|EMBL:AFU59209.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="
13_1_40cm_3_scaffold_1247_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2405..3028
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJC2_NITGG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59208.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1247_trna_1
unknown

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comp(3108..3181)
DNA (74bp)
transferRNA
13_1_40cm_3_scaffold_1247_6
BJP_S1_SUB10_Methanoculleus_61_9, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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3486..4376
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XBT6_9BACT
alpha/beta hydrolase
Tax=BJP_S1_SUB10_Methanoculleus_61_9
13_1_40cm_3_scaffold_1247_7
unknown

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comp(4735..4830)
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_40cm_3_scaffold_1247_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5929..6810
DNA (882bp) protein (294aa)
Formyltetrahydrofolate deformylase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKX3_NITGG rbh
purU; formyltetrahydrofolate deformylase
Formyltetrahydrofolate deformylase {ECO:0000313|EMBL:AFU59197.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitr
13_1_40cm_3_scaffold_1247_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6839..7546
DNA (708bp) protein (236aa)
creatinine amidohydrolase (EC:3.5.2.10)
Creatinine amidohydrolase {ECO:0000313|EMBL:AFU59196.1}; EC=3.5.2.10 {ECO:0000313|EMBL:AFU59196.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaerac
Creatinine amidohydrolase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICW1_NITGG rbh
13_1_40cm_3_scaffold_1247_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7592..7822
DNA (231bp) protein (77aa)
Putative small nuclear ribonucleoprotein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH49_NITGG
Small nuclear ribonucleoprotein, LSM family
Putative small nuclear ribonucleoprotein {ECO:0000313|EMBL:AFU59195.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source
13_1_40cm_3_scaffold_1247_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7865..8014
DNA (150bp) protein (50aa)
50S ribosomal protein L37e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IND7_NITGG
rpl37ae; 50S ribosomal protein L37e
50S ribosomal protein L37e {ECO:0000256|HAMAP-Rule:MF_00547, ECO:0000256|SAAS:SAAS00257304}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nit
13_1_40cm_3_scaffold_1247_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

8036..8644
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJB4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59193.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1247_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8641..8739)
DNA (99bp) protein (33aa)
Putative diacylglycerol kinase, catalytic region {ECO:0000313|EMBL:AFU59192.1}; EC=2.7.1.107 {ECO:0000313|EMBL:AFU59192.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososph
13_1_40cm_3_scaffold_1247_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(8712..8999)
DNA (288bp) protein (96aa)
diacylglycerol kinase, catalytic region (EC:2.7.1.107)
Putative diacylglycerol kinase, catalytic region {ECO:0000313|EMBL:AFU59192.1}; EC=2.7.1.107 {ECO:0000313|EMBL:AFU59192.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososph
Putative diacylglycerol kinase, catalytic region n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKW9_NITGG
13_1_40cm_3_scaffold_1247_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(8945..9181)
DNA (237bp) protein (79aa)
diacylglycerol kinase, catalytic region (EC:2.7.1.107)
Putative diacylglycerol kinase, catalytic region {ECO:0000313|EMBL:AFU59192.1}; EC=2.7.1.107 {ECO:0000313|EMBL:AFU59192.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososph
Putative diacylglycerol kinase, catalytic region n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKW9_NITGG
13_1_40cm_3_scaffold_1247_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(9262..9534)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICV9_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59191.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1247_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

9691..10524
DNA (834bp) protein (278aa)
folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH46_NITGG rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososp
13_1_40cm_3_scaffold_1247_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

10555..11070
DNA (516bp) protein (172aa)
Putative 5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IND6_NITGG
5-formyltetrahydrofolate cyclo-ligase
Putative 5-formyltetrahydrofolate cyclo-ligase {ECO:0000313|EMBL:AFU59189.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;"
13_1_40cm_3_scaffold_1247_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(11067..12341)
DNA (1275bp) protein (425aa)
purD; phosphoribosylamine--glycine ligase (EC:2.1.2.2)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
Phosphoribosylamine--glycine ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJB1_NITGG rbh
13_1_40cm_3_scaffold_1247_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

12436..12915
DNA (480bp) protein (160aa)
Putative general stress protein GsiB n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKW7_NITGG
gsiB; general stress protein GsiB
Putative general stress protein GsiB {ECO:0000313|EMBL:AFU59187.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Ni
13_1_40cm_3_scaffold_1247_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(12901..13212)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICV6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59186.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1247_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13245..13988
DNA (744bp) protein (248aa)
Putative phosphoesterase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH42_NITGG rbh
phosphoesterase
Putative phosphoesterase {ECO:0000313|EMBL:AFU59185.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1247_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

14262..14723
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKZ1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59222.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1247_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(15251..15556)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICB8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57185.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1247_25

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comp(15556..15819)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=uncultured archaeon RepID=I3RKU6_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK24956.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
13_1_40cm_3_scaffold_1247_26
unknown

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16780..17052
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_40cm_3_scaffold_1247_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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17328..17555
DNA (228bp) protein (76aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHE5_NITGG
AsnC family transcriptional regulator
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:AFU57192.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;"
Displaying 29 items

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